Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
LRRK2Q5S007 MIR219A2-201ENST00000608502 1504 ntBASIC22.71■■□□□ 1.23
LRRK2Q5S007 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRK2Q5S007 ECEL1P2-201ENST00000461596 1295 ntBASIC22.71■■□□□ 1.23
LRRK2Q5S007 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
LRRK2Q5S007 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
LRRK2Q5S007 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
LRRK2Q5S007 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
LRRK2Q5S007 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
LRRK2Q5S007 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
LRRK2Q5S007 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC22.69■■□□□ 1.22
LRRK2Q5S007 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.68■■□□□ 1.22
LRRK2Q5S007 RP9P-202ENST00000450133 1212 ntBASIC22.68■■□□□ 1.22
LRRK2Q5S007 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.68■■□□□ 1.22
LRRK2Q5S007 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
LRRK2Q5S007 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.67■■□□□ 1.22
LRRK2Q5S007 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.67■■□□□ 1.22
LRRK2Q5S007 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.67■■□□□ 1.22
LRRK2Q5S007 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC22.67■■□□□ 1.22
LRRK2Q5S007 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
LRRK2Q5S007 DUX4L9-201ENST00000449051 1259 ntBASIC22.66■■□□□ 1.22
LRRK2Q5S007 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.66■■□□□ 1.22
LRRK2Q5S007 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRK2Q5S007 AL157400.5-201ENST00000507624 621 ntBASIC22.66■■□□□ 1.22
LRRK2Q5S007 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.66■■□□□ 1.22
LRRK2Q5S007 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
LRRK2Q5S007 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRK2Q5S007 AC007029.1-201ENST00000604183 313 ntBASIC22.65■■□□□ 1.22
LRRK2Q5S007 AC133552.2-201ENST00000619106 1032 ntBASIC22.65■■□□□ 1.22
LRRK2Q5S007 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRK2Q5S007 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
LRRK2Q5S007 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRK2Q5S007 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRK2Q5S007 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
LRRK2Q5S007 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
LRRK2Q5S007 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.64■■□□□ 1.22
LRRK2Q5S007 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
LRRK2Q5S007 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
LRRK2Q5S007 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRK2Q5S007 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
LRRK2Q5S007 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRK2Q5S007 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRK2Q5S007 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRK2Q5S007 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.63■■□□□ 1.21
LRRK2Q5S007 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
LRRK2Q5S007 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
LRRK2Q5S007 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRK2Q5S007 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
LRRK2Q5S007 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
LRRK2Q5S007 AC009831.1-201ENST00000580420 1582 ntBASIC22.62■■□□□ 1.21
LRRK2Q5S007 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.62■■□□□ 1.21
LRRK2Q5S007 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
LRRK2Q5S007 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRK2Q5S007 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.6■■□□□ 1.21
LRRK2Q5S007 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LRRK2Q5S007 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
LRRK2Q5S007 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LRRK2Q5S007 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LRRK2Q5S007 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.59■■□□□ 1.21
LRRK2Q5S007 AC025884.2-201ENST00000553429 711 ntBASIC22.59■■□□□ 1.21
LRRK2Q5S007 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LRRK2Q5S007 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRK2Q5S007 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LRRK2Q5S007 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.58■■□□□ 1.21
LRRK2Q5S007 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.57■■□□□ 1.2
LRRK2Q5S007 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
LRRK2Q5S007 AC010980.1-201ENST00000587192 1142 ntBASIC22.57■■□□□ 1.2
LRRK2Q5S007 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRK2Q5S007 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
LRRK2Q5S007 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
LRRK2Q5S007 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
LRRK2Q5S007 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.56■■□□□ 1.2
LRRK2Q5S007 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRK2Q5S007 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRK2Q5S007 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRK2Q5S007 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
LRRK2Q5S007 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.55■■□□□ 1.2
LRRK2Q5S007 RAP2CP1-202ENST00000605179 643 ntBASIC22.55■■□□□ 1.2
LRRK2Q5S007 WHAMMP2-203ENST00000563942 1603 ntBASIC22.54■■□□□ 1.2
LRRK2Q5S007 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
LRRK2Q5S007 AL592293.1-201ENST00000502889 1188 ntBASIC22.54■■□□□ 1.2
LRRK2Q5S007 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRK2Q5S007 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRK2Q5S007 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRK2Q5S007 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
LRRK2Q5S007 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
LRRK2Q5S007 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.52■■□□□ 1.19
LRRK2Q5S007 AC110285.7-201ENST00000624417 1536 ntBASIC22.51■■□□□ 1.19
LRRK2Q5S007 YBX1P4-201ENST00000392794 808 ntBASIC22.51■■□□□ 1.19
LRRK2Q5S007 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
LRRK2Q5S007 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRK2Q5S007 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
LRRK2Q5S007 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.51■■□□□ 1.19
LRRK2Q5S007 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms