Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HMGA2P52926 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HMGA2P52926 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.28■■□□□ 1.32
HMGA2P52926 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HMGA2P52926 AC136428.2-201ENST00000563187 214 ntBASIC23.27■■□□□ 1.32
HMGA2P52926 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HMGA2P52926 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.26■■□□□ 1.31
HMGA2P52926 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.26■■□□□ 1.31
HMGA2P52926 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.26■■□□□ 1.31
HMGA2P52926 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
HMGA2P52926 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
HMGA2P52926 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
HMGA2P52926 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.25■■□□□ 1.31
HMGA2P52926 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
HMGA2P52926 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGA2P52926 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
HMGA2P52926 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HMGA2P52926 AC018358.1-201ENST00000631079 1402 ntBASIC23.24■■□□□ 1.31
HMGA2P52926 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HMGA2P52926 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGA2P52926 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGA2P52926 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGA2P52926 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HMGA2P52926 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HMGA2P52926 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HMGA2P52926 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGA2P52926 AL449106.1-201ENST00000608517 1980 ntBASIC23.21■■□□□ 1.31
HMGA2P52926 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.21■■□□□ 1.31
HMGA2P52926 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.21■■□□□ 1.31
HMGA2P52926 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGA2P52926 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HMGA2P52926 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
HMGA2P52926 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.2■■□□□ 1.3
HMGA2P52926 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.2■■□□□ 1.3
HMGA2P52926 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGA2P52926 AC135983.2-203ENST00000454486 1613 ntBASIC23.2■■□□□ 1.3
HMGA2P52926 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.2■■□□□ 1.3
HMGA2P52926 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HMGA2P52926 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
HMGA2P52926 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HMGA2P52926 AC097358.2-201ENST00000607541 1159 ntBASIC23.19■■□□□ 1.3
HMGA2P52926 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
HMGA2P52926 AC091060.1-201ENST00000623524 1766 ntBASIC23.19■■□□□ 1.3
HMGA2P52926 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HMGA2P52926 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
HMGA2P52926 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HMGA2P52926 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
HMGA2P52926 MIR762-201ENST00000390236 83 ntBASIC23.17■■□□□ 1.3
HMGA2P52926 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.17■■□□□ 1.3
HMGA2P52926 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGA2P52926 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HMGA2P52926 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HMGA2P52926 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.17■■□□□ 1.3
HMGA2P52926 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HMGA2P52926 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HMGA2P52926 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
HMGA2P52926 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.15■■□□□ 1.3
HMGA2P52926 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
HMGA2P52926 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
HMGA2P52926 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
HMGA2P52926 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.14■■□□□ 1.29
HMGA2P52926 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.14■■□□□ 1.29
HMGA2P52926 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.14■■□□□ 1.29
HMGA2P52926 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HMGA2P52926 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
HMGA2P52926 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGA2P52926 AC135731.1-201ENST00000569415 2548 ntBASIC23.13■■□□□ 1.29
HMGA2P52926 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
HMGA2P52926 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
HMGA2P52926 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
HMGA2P52926 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HMGA2P52926 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGA2P52926 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.12■■□□□ 1.29
HMGA2P52926 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGA2P52926 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGA2P52926 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HMGA2P52926 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.12■■□□□ 1.29
HMGA2P52926 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HMGA2P52926 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGA2P52926 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGA2P52926 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HMGA2P52926 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
HMGA2P52926 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.1■■□□□ 1.29
HMGA2P52926 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HMGA2P52926 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.1■■□□□ 1.29
HMGA2P52926 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HMGA2P52926 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.1■■□□□ 1.29
HMGA2P52926 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HMGA2P52926 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
HMGA2P52926 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGA2P52926 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGA2P52926 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.09■■□□□ 1.29
HMGA2P52926 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HMGA2P52926 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
HMGA2P52926 WHAMMP2-203ENST00000563942 1603 ntBASIC23.08■■□□□ 1.29
HMGA2P52926 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HMGA2P52926 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HMGA2P52926 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.07■■□□□ 1.28
HMGA2P52926 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HMGA2P52926 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms