Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CD40P25942 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.04■■□□□ 1.12
CD40P25942 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.04■■□□□ 1.12
CD40P25942 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD40P25942 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.04■■□□□ 1.12
CD40P25942 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD40P25942 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CD40P25942 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD40P25942 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.03■■□□□ 1.12
CD40P25942 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CD40P25942 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.03■■□□□ 1.12
CD40P25942 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.03■■□□□ 1.12
CD40P25942 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.03■■□□□ 1.12
CD40P25942 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CD40P25942 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD40P25942 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD40P25942 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CD40P25942 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CD40P25942 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CD40P25942 AC100797.4-201ENST00000631653 1827 ntBASIC22.01■■□□□ 1.11
CD40P25942 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD40P25942 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CD40P25942 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CD40P25942 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22■■□□□ 1.11
CD40P25942 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
CD40P25942 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22■■□□□ 1.11
CD40P25942 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CD40P25942 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22■■□□□ 1.11
CD40P25942 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.99■■□□□ 1.11
CD40P25942 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD40P25942 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD40P25942 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CD40P25942 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.99■■□□□ 1.11
CD40P25942 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD40P25942 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CD40P25942 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CD40P25942 AC148477.6-201ENST00000623746 465 ntBASIC21.98■■□□□ 1.11
CD40P25942 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CD40P25942 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CD40P25942 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CD40P25942 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CD40P25942 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CD40P25942 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.97■■□□□ 1.11
CD40P25942 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.97■■□□□ 1.11
CD40P25942 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD40P25942 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.96■■□□□ 1.11
CD40P25942 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.96■■□□□ 1.11
CD40P25942 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD40P25942 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CD40P25942 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CD40P25942 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CD40P25942 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CD40P25942 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.95■■□□□ 1.1
CD40P25942 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.95■■□□□ 1.1
CD40P25942 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.95■■□□□ 1.1
CD40P25942 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.95■■□□□ 1.1
CD40P25942 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CD40P25942 ABCB10P3-201ENST00000561950 2166 ntBASIC21.94■■□□□ 1.1
CD40P25942 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
CD40P25942 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.93■■□□□ 1.1
CD40P25942 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD40P25942 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CD40P25942 CEP120-209ENST00000515110 606 ntTSL 3 BASIC21.93■■□□□ 1.1
CD40P25942 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.93■■□□□ 1.1
CD40P25942 GPX1-201ENST00000419349 1106 ntBASIC21.92■■□□□ 1.1
CD40P25942 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
CD40P25942 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CD40P25942 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD40P25942 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD40P25942 MIR219A2-201ENST00000608502 1504 ntBASIC21.91■■□□□ 1.1
CD40P25942 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CD40P25942 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CD40P25942 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD40P25942 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.9■■□□□ 1.1
CD40P25942 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CD40P25942 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.9■■□□□ 1.1
CD40P25942 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD40P25942 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CD40P25942 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CD40P25942 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.89■■□□□ 1.1
CD40P25942 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.89■■□□□ 1.09
CD40P25942 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CD40P25942 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CD40P25942 AC022413.1-201ENST00000624602 984 ntBASIC21.88■■□□□ 1.09
CD40P25942 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CD40P25942 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CD40P25942 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD40P25942 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.87■■□□□ 1.09
CD40P25942 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
CD40P25942 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD40P25942 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CD40P25942 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.86■■□□□ 1.09
CD40P25942 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CD40P25942 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD40P25942 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD40P25942 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CD40P25942 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CD40P25942 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CD40P25942 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.85■■□□□ 1.09
CD40P25942 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms