Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 EIF4A1-232ENST00000584712 782 ntTSL 210.49□□□□□ -0.736e-7■■■■□ 22.5
SFPQP23246 EIF4A1-209ENST00000578495 916 ntTSL 510.48□□□□□ -0.736e-7■■■■□ 22.5
SFPQP23246 EIF4A1-212ENST00000579085 569 ntTSL 49.94□□□□□ -0.826e-7■■■■□ 22.5
SFPQP23246 EIF4A1-237ENST00000585024 577 ntTSL 49.62□□□□□ -0.876e-7■■■■□ 22.5
SFPQP23246 EIF4A1-202ENST00000396527 1169 ntTSL 28.78□□□□□ -16e-7■■■■□ 22.5
SFPQP23246 EIF4A1-230ENST00000583899 665 ntTSL 36.93□□□□□ -1.36e-7■■■■□ 22.5
SFPQP23246 EIF4A1-211ENST00000578754 547 ntTSL 46.03□□□□□ -1.446e-7■■■■□ 22.5
SFPQP23246 EIF4A1-224ENST00000582213 560 ntTSL 44.38□□□□□ -1.716e-7■■■■□ 22.5
SFPQP23246 CUX1-220ENST00000607092 559 ntTSL 37.11□□□□□ -1.271e-6■■■■□ 22.3
SFPQP23246 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.132e-9■■■■□ 22.2
SFPQP23246 PGS1-211ENST00000589425 1944 ntTSL 1 (best)21.48■■□□□ 1.032e-9■■■■□ 22.2
SFPQP23246 PGS1-209ENST00000588169 1700 ntTSL 221.28■■□□□ 12e-9■■■■□ 22.2
SFPQP23246 PGS1-212ENST00000589426 2033 ntTSL 1 (best)21.05■□□□□ 0.962e-9■■■■□ 22.2
SFPQP23246 PGS1-210ENST00000588281 1776 ntTSL 1 (best)18.63■□□□□ 0.572e-9■■■■□ 22.2
SFPQP23246 PGS1-202ENST00000585521 721 ntTSL 518.38■□□□□ 0.532e-9■■■■□ 22.2
SFPQP23246 PGS1-214ENST00000591996 3062 ntTSL 1 (best)14.92□□□□□ -0.022e-9■■■■□ 22.2
SFPQP23246 PGS1-205ENST00000586355 584 ntTSL 412.65□□□□□ -0.382e-9■■■■□ 22.2
SFPQP23246 AKT1-212ENST00000555380 534 ntTSL 412.63□□□□□ -0.393e-6■■■■□ 22.2
SFPQP23246 PGS1-203ENST00000586019 572 ntTSL 411.02□□□□□ -0.652e-9■■■■□ 22.2
SFPQP23246 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.472e-6■■■■□ 22.1
SFPQP23246 SORBS2-210ENST00000419063 835 ntTSL 318.24■□□□□ 0.517e-7■■■■□ 22
SFPQP23246 SORBS2-247ENST00000470685 1790 ntTSL 516.45■□□□□ 0.227e-7■■■■□ 22
SFPQP23246 SORBS2-261ENST00000493709 715 ntTSL 315.41■□□□□ 0.067e-7■■■■□ 22
SFPQP23246 SORBS2-250ENST00000478249 594 ntTSL 514.5□□□□□ -0.097e-7■■■■□ 22
SFPQP23246 SORBS2-242ENST00000463104 567 ntTSL 514.45□□□□□ -0.17e-7■■■■□ 22
SFPQP23246 SORBS2-203ENST00000319471 2824 ntTSL 1 (best) BASIC14.2□□□□□ -0.147e-7■■■■□ 22
SFPQP23246 SORBS2-205ENST00000393523 842 ntTSL 413.24□□□□□ -0.297e-7■■■■□ 22
SFPQP23246 SORBS2-232ENST00000450341 567 ntTSL 413.01□□□□□ -0.337e-7■■■■□ 22
SFPQP23246 SORBS2-202ENST00000319454 2011 ntTSL 1 (best)12.79□□□□□ -0.367e-7■■■■□ 22
SFPQP23246 SORBS2-237ENST00000456060 543 ntTSL 412.4□□□□□ -0.427e-7■■■■□ 22
SFPQP23246 SORBS2-234ENST00000451958 594 ntTSL 412.4□□□□□ -0.427e-7■■■■□ 22
SFPQP23246 SORBS2-216ENST00000429056 534 ntTSL 412.4□□□□□ -0.427e-7■■■■□ 22
SFPQP23246 SORBS2-231ENST00000449407 3049 ntTSL 1 (best) BASIC12.15□□□□□ -0.467e-7■■■■□ 22
SFPQP23246 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC11.48□□□□□ -0.577e-7■■■■□ 22
SFPQP23246 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC10.99□□□□□ -0.657e-7■■■■□ 22
SFPQP23246 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.677e-7■■■■□ 22
SFPQP23246 SORBS2-207ENST00000414724 590 ntTSL 510.73□□□□□ -0.697e-7■■■■□ 22
SFPQP23246 SORBS2-224ENST00000439914 565 ntTSL 59.78□□□□□ -0.847e-7■■■■□ 22
SFPQP23246 SORBS2-226ENST00000444781 611 ntTSL 59.38□□□□□ -0.917e-7■■■■□ 22
SFPQP23246 SORBS2-208ENST00000415274 626 ntTSL 49.38□□□□□ -0.917e-7■■■■□ 22
SFPQP23246 SORBS2-220ENST00000435480 487 ntTSL 49.38□□□□□ -0.917e-7■■■■□ 22
SFPQP23246 SORBS2-218ENST00000431902 562 ntTSL 58.62□□□□□ -1.037e-7■■■■□ 22
SFPQP23246 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.35□□□□□ -1.077e-7■■■■□ 22
SFPQP23246 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.12□□□□□ -1.117e-7■■■■□ 22
SFPQP23246 SORBS2-215ENST00000428330 525 ntTSL 47.8□□□□□ -1.167e-7■■■■□ 22
SFPQP23246 SORBS2-214ENST00000425679 629 ntTSL 26.93□□□□□ -1.37e-7■■■■□ 22
SFPQP23246 SORBS2-223ENST00000439049 549 ntTSL 46.93□□□□□ -1.37e-7■■■■□ 22
SFPQP23246 SORBS2-225ENST00000444771 760 ntTSL 26.72□□□□□ -1.337e-7■■■■□ 22
SFPQP23246 SORBS2-243ENST00000464819 540 ntTSL 46.44□□□□□ -1.387e-7■■■■□ 22
SFPQP23246 SORBS2-213ENST00000421639 572 ntTSL 35.89□□□□□ -1.477e-7■■■■□ 22
SFPQP23246 SORBS2-211ENST00000420158 572 ntTSL 45.89□□□□□ -1.477e-7■■■■□ 22
SFPQP23246 SORBS2-244ENST00000464975 563 ntTSL 45.07□□□□□ -1.67e-7■■■■□ 22
SFPQP23246 SORBS2-233ENST00000451701 582 ntTSL 35.02□□□□□ -1.617e-7■■■■□ 22
SFPQP23246 SORBS2-239ENST00000457247 573 ntTSL 44.25□□□□□ -1.737e-7■■■■□ 22
SFPQP23246 SORBS2-219ENST00000432655 582 ntTSL 34.02□□□□□ -1.777e-7■■■■□ 22
SFPQP23246 SORBS2-240ENST00000457934 553 ntTSL 43.41□□□□□ -1.867e-7■■■■□ 22
SFPQP23246 SORBS2-217ENST00000430503 499 ntTSL 53.2□□□□□ -1.97e-7■■■■□ 22
SFPQP23246 SORBS2-227ENST00000445115 575 ntTSL 43.19□□□□□ -1.97e-7■■■■□ 22
SFPQP23246 SORBS2-238ENST00000456596 574 ntTSL 42.89□□□□□ -1.957e-7■■■■□ 22
SFPQP23246 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.02■■■□□ 2.086e-6■■■■□ 22
SFPQP23246 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.21■■□□□ 1.796e-6■■■■□ 22
SFPQP23246 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.28■■□□□ 1.646e-6■■■■□ 22
SFPQP23246 TOLLIP-204ENST00000527085 595 ntTSL 525.28■■□□□ 1.646e-6■■■■□ 22
SFPQP23246 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.9■■□□□ 1.586e-6■■■■□ 22
SFPQP23246 TOLLIP-206ENST00000527746 590 ntTSL 223.76■■□□□ 1.396e-6■■■■□ 22
SFPQP23246 TOLLIP-210ENST00000530506 1297 ntTSL 522.52■■□□□ 1.26e-6■■■■□ 22
SFPQP23246 TOLLIP-205ENST00000527638 561 ntTSL 422.52■■□□□ 1.26e-6■■■■□ 22
SFPQP23246 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.36■■□□□ 1.176e-6■■■■□ 22
SFPQP23246 CDKN1A-206ENST00000462537 553 ntTSL 320.64■□□□□ 0.896e-6■■■■□ 22
SFPQP23246 CDKN1A-205ENST00000459970 604 ntTSL 520.19■□□□□ 0.826e-6■■■■□ 22
SFPQP23246 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.746e-6■■■■□ 22
SFPQP23246 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.76e-6■■■■□ 22
SFPQP23246 SLC7A1-202ENST00000450494 547 ntTSL 219.2■□□□□ 0.666e-6■■■■□ 22
SFPQP23246 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.646e-6■■■■□ 22
SFPQP23246 PRKCZ-216ENST00000479566 501 ntTSL 318.92■□□□□ 0.626e-6■■■■□ 22
SFPQP23246 CDKN1A-207ENST00000478800 616 ntTSL 218.92■□□□□ 0.626e-6■■■■□ 22
SFPQP23246 TSNARE1-202ENST00000518720 583 ntTSL 418.9■□□□□ 0.626e-6■■■■□ 22
SFPQP23246 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.586e-6■■■■□ 22
SFPQP23246 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.576e-6■■■■□ 22
SFPQP23246 TOLLIP-211ENST00000530541 684 ntTSL 218.5■□□□□ 0.556e-6■■■■□ 22
SFPQP23246 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.446e-6■■■■□ 22
SFPQP23246 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.386e-6■■■■□ 22
SFPQP23246 TSNARE1-206ENST00000520462 589 ntTSL 417.16■□□□□ 0.346e-6■■■■□ 22
SFPQP23246 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.296e-6■■■■□ 22
SFPQP23246 TOLLIP-212ENST00000530821 428 ntTSL 316.76■□□□□ 0.276e-6■■■■□ 22
SFPQP23246 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.276e-6■■■■□ 22
SFPQP23246 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.266e-6■■■■□ 22
SFPQP23246 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.226e-6■■■■□ 22
SFPQP23246 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.156e-6■■■■□ 22
SFPQP23246 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.85■□□□□ 0.136e-6■■■■□ 22
SFPQP23246 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC14.95□□□□□ -0.026e-6■■■■□ 22
SFPQP23246 TOLLIP-213ENST00000532551 576 ntTSL 214.11□□□□□ -0.156e-6■■■■□ 22
SFPQP23246 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.226e-6■■■■□ 22
SFPQP23246 KLC1-220ENST00000555856 535 ntTSL 311.82□□□□□ -0.526e-6■■■■□ 22
SFPQP23246 TRPV1-203ENST00000399759 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.646e-6■■■■□ 22
SFPQP23246 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.676e-6■■■■□ 22
SFPQP23246 ARID2-201ENST00000334344 8642 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.716e-6■■■■□ 22
SFPQP23246 PCSK6-207ENST00000558951 543 ntTSL 310.58□□□□□ -0.726e-6■■■■□ 22
SFPQP23246 PCSK6-202ENST00000398185 3723 ntTSL 1 (best)10.17□□□□□ -0.786e-6■■■■□ 22
SFPQP23246 PCSK6-211ENST00000559605 379 ntTSL 39.55□□□□□ -0.886e-6■■■■□ 22
Retrieved 100 of 4,991 protein–RNA pairs in 67.2 ms