Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.97■■□□□ 1.11
CCL1P22362 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCL1P22362 AC018358.1-201ENST00000631079 1402 ntBASIC21.97■■□□□ 1.11
CCL1P22362 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCL1P22362 AP006261.1-201ENST00000584783 668 ntBASIC21.96■■□□□ 1.11
CCL1P22362 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCL1P22362 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.96■■□□□ 1.11
CCL1P22362 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.95■■□□□ 1.1
CCL1P22362 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.95■■□□□ 1.1
CCL1P22362 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.95■■□□□ 1.1
CCL1P22362 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCL1P22362 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL1P22362 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCL1P22362 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCL1P22362 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCL1P22362 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CCL1P22362 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
CCL1P22362 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCL1P22362 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CCL1P22362 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCL1P22362 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.9■■□□□ 1.1
CCL1P22362 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.89■■□□□ 1.1
CCL1P22362 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
CCL1P22362 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CCL1P22362 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.88■■□□□ 1.09
CCL1P22362 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.88■■□□□ 1.09
CCL1P22362 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.88■■□□□ 1.09
CCL1P22362 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL1P22362 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CCL1P22362 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.87■■□□□ 1.09
CCL1P22362 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CCL1P22362 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
CCL1P22362 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.86■■□□□ 1.09
CCL1P22362 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CCL1P22362 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.86■■□□□ 1.09
CCL1P22362 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CCL1P22362 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.86■■□□□ 1.09
CCL1P22362 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.86■■□□□ 1.09
CCL1P22362 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 AC087741.3-201ENST00000624270 1347 ntBASIC21.85■■□□□ 1.09
CCL1P22362 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CCL1P22362 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CCL1P22362 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CCL1P22362 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.84■■□□□ 1.09
CCL1P22362 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CCL1P22362 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCL1P22362 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CCL1P22362 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CCL1P22362 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.83■■□□□ 1.08
CCL1P22362 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.83■■□□□ 1.08
CCL1P22362 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.83■■□□□ 1.08
CCL1P22362 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.82■■□□□ 1.08
CCL1P22362 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCL1P22362 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCL1P22362 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL1P22362 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.81■■□□□ 1.08
CCL1P22362 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCL1P22362 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.8■■□□□ 1.08
CCL1P22362 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCL1P22362 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCL1P22362 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.79■■□□□ 1.08
CCL1P22362 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.79■■□□□ 1.08
CCL1P22362 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 AL162393.1-201ENST00000437852 946 ntBASIC21.79■■□□□ 1.08
CCL1P22362 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCL1P22362 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCL1P22362 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL1P22362 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCL1P22362 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CCL1P22362 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.78■■□□□ 1.08
CCL1P22362 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CCL1P22362 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.77■■□□□ 1.08
CCL1P22362 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.76■■□□□ 1.07
CCL1P22362 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CCL1P22362 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CCL1P22362 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.76■■□□□ 1.07
CCL1P22362 AC044849.2-201ENST00000606596 710 ntBASIC21.76■■□□□ 1.07
CCL1P22362 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms