Protein–RNA interactions for Protein: P12694

BCKDHA, 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHAP12694 WHAMMP2-203ENST00000563942 1603 ntBASIC24.29■■□□□ 1.48
BCKDHAP12694 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BCKDHAP12694 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
BCKDHAP12694 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
BCKDHAP12694 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.29■■□□□ 1.48
BCKDHAP12694 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
BCKDHAP12694 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.28■■□□□ 1.48
BCKDHAP12694 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
BCKDHAP12694 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BCKDHAP12694 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BCKDHAP12694 MIR3665-201ENST00000578708 105 ntBASIC24.27■■□□□ 1.48
BCKDHAP12694 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BCKDHAP12694 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
BCKDHAP12694 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.26■■□□□ 1.47
BCKDHAP12694 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
BCKDHAP12694 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BCKDHAP12694 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
BCKDHAP12694 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BCKDHAP12694 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
BCKDHAP12694 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
BCKDHAP12694 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
BCKDHAP12694 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BCKDHAP12694 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
BCKDHAP12694 LINC00273-201ENST00000539813 1452 ntBASIC24.24■■□□□ 1.47
BCKDHAP12694 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
BCKDHAP12694 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
BCKDHAP12694 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
BCKDHAP12694 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.23■■□□□ 1.47
BCKDHAP12694 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
BCKDHAP12694 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
BCKDHAP12694 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
BCKDHAP12694 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
BCKDHAP12694 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
BCKDHAP12694 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.22■■□□□ 1.47
BCKDHAP12694 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.21■■□□□ 1.47
BCKDHAP12694 AP006261.1-201ENST00000584783 668 ntBASIC24.21■■□□□ 1.47
BCKDHAP12694 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.2■■□□□ 1.46
BCKDHAP12694 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
BCKDHAP12694 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCKDHAP12694 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
BCKDHAP12694 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
BCKDHAP12694 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BCKDHAP12694 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.18■■□□□ 1.46
BCKDHAP12694 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
BCKDHAP12694 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
BCKDHAP12694 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
BCKDHAP12694 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
BCKDHAP12694 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
BCKDHAP12694 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.17■■□□□ 1.46
BCKDHAP12694 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
BCKDHAP12694 AC018358.1-201ENST00000631079 1402 ntBASIC24.16■■□□□ 1.46
BCKDHAP12694 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.15■■□□□ 1.46
BCKDHAP12694 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.15■■□□□ 1.46
BCKDHAP12694 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.14■■□□□ 1.46
BCKDHAP12694 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
BCKDHAP12694 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.14■■□□□ 1.45
BCKDHAP12694 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
BCKDHAP12694 AC087741.3-201ENST00000624270 1347 ntBASIC24.13■■□□□ 1.45
BCKDHAP12694 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCKDHAP12694 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
BCKDHAP12694 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCKDHAP12694 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
BCKDHAP12694 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
BCKDHAP12694 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
BCKDHAP12694 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
BCKDHAP12694 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
BCKDHAP12694 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
BCKDHAP12694 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
BCKDHAP12694 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
BCKDHAP12694 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.11■■□□□ 1.45
BCKDHAP12694 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.11■■□□□ 1.45
BCKDHAP12694 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.11■■□□□ 1.45
BCKDHAP12694 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
BCKDHAP12694 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.1■■□□□ 1.45
BCKDHAP12694 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
BCKDHAP12694 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
BCKDHAP12694 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCKDHAP12694 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
BCKDHAP12694 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.1■■□□□ 1.45
BCKDHAP12694 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.1■■□□□ 1.45
BCKDHAP12694 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
BCKDHAP12694 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.1■■□□□ 1.45
BCKDHAP12694 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.09■■□□□ 1.45
BCKDHAP12694 AL162393.1-201ENST00000437852 946 ntBASIC24.09■■□□□ 1.45
BCKDHAP12694 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.09■■□□□ 1.45
BCKDHAP12694 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.09■■□□□ 1.45
BCKDHAP12694 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.09■■□□□ 1.45
BCKDHAP12694 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
BCKDHAP12694 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
BCKDHAP12694 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
BCKDHAP12694 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
BCKDHAP12694 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
BCKDHAP12694 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.07■■□□□ 1.44
BCKDHAP12694 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
BCKDHAP12694 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
BCKDHAP12694 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
BCKDHAP12694 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
BCKDHAP12694 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
BCKDHAP12694 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
BCKDHAP12694 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms