Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
SNRPA1P09661 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
SNRPA1P09661 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC32.9■■■□□ 2.86
SNRPA1P09661 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
SNRPA1P09661 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
SNRPA1P09661 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.89■■■□□ 2.86
SNRPA1P09661 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
SNRPA1P09661 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC32.88■■■□□ 2.85
SNRPA1P09661 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
SNRPA1P09661 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.87■■■□□ 2.85
SNRPA1P09661 ABHD17AP5-201ENST00000580133 923 ntBASIC32.87■■■□□ 2.85
SNRPA1P09661 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
SNRPA1P09661 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC32.86■■■□□ 2.85
SNRPA1P09661 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC32.86■■■□□ 2.85
SNRPA1P09661 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC32.86■■■□□ 2.85
SNRPA1P09661 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
SNRPA1P09661 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
SNRPA1P09661 AP004833.2-201ENST00000532228 1454 ntBASIC32.85■■■□□ 2.85
SNRPA1P09661 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC32.85■■■□□ 2.85
SNRPA1P09661 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNRPA1P09661 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
SNRPA1P09661 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
SNRPA1P09661 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.83■■■□□ 2.85
SNRPA1P09661 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
SNRPA1P09661 MIR219A2-201ENST00000608502 1504 ntBASIC32.82■■■□□ 2.85
SNRPA1P09661 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC32.82■■■□□ 2.84
SNRPA1P09661 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC32.82■■■□□ 2.84
SNRPA1P09661 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
SNRPA1P09661 HES4-202ENST00000428771 1040 ntTSL 2 BASIC32.81■■■□□ 2.84
SNRPA1P09661 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SNRPA1P09661 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
SNRPA1P09661 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC32.8■■■□□ 2.84
SNRPA1P09661 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SNRPA1P09661 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC32.79■■■□□ 2.84
SNRPA1P09661 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
SNRPA1P09661 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
SNRPA1P09661 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SNRPA1P09661 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
SNRPA1P09661 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.76■■■□□ 2.83
SNRPA1P09661 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
SNRPA1P09661 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
SNRPA1P09661 AC060814.1-201ENST00000554326 538 ntBASIC32.76■■■□□ 2.83
SNRPA1P09661 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
SNRPA1P09661 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
SNRPA1P09661 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
SNRPA1P09661 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
SNRPA1P09661 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.75■■■□□ 2.83
SNRPA1P09661 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SNRPA1P09661 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
SNRPA1P09661 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
SNRPA1P09661 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.74■■■□□ 2.83
SNRPA1P09661 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.71■■■□□ 2.83
SNRPA1P09661 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.7■■■□□ 2.83
SNRPA1P09661 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC32.7■■■□□ 2.82
SNRPA1P09661 AC100797.4-201ENST00000631653 1827 ntBASIC32.7■■■□□ 2.82
SNRPA1P09661 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
SNRPA1P09661 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SNRPA1P09661 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
SNRPA1P09661 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
SNRPA1P09661 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
SNRPA1P09661 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.67■■■□□ 2.82
SNRPA1P09661 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC32.67■■■□□ 2.82
SNRPA1P09661 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNRPA1P09661 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
SNRPA1P09661 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.65■■■□□ 2.82
SNRPA1P09661 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
SNRPA1P09661 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC32.64■■■□□ 2.82
SNRPA1P09661 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
SNRPA1P09661 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.64■■■□□ 2.82
SNRPA1P09661 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.63■■■□□ 2.81
SNRPA1P09661 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SNRPA1P09661 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.61■■■□□ 2.81
SNRPA1P09661 NTF6A-201ENST00000591175 560 ntBASIC32.61■■■□□ 2.81
SNRPA1P09661 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC32.61■■■□□ 2.81
SNRPA1P09661 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
SNRPA1P09661 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
SNRPA1P09661 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.6■■■□□ 2.81
SNRPA1P09661 AC092296.2-201ENST00000589470 999 ntBASIC32.6■■■□□ 2.81
SNRPA1P09661 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
SNRPA1P09661 MED25-210ENST00000612854 801 ntTSL 5 BASIC32.59■■■□□ 2.81
SNRPA1P09661 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC32.59■■■□□ 2.81
SNRPA1P09661 MED25-214ENST00000622402 642 ntTSL 5 BASIC32.59■■■□□ 2.81
SNRPA1P09661 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC32.58■■■□□ 2.81
SNRPA1P09661 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SNRPA1P09661 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SNRPA1P09661 AL139393.2-201ENST00000608721 2025 ntBASIC32.57■■■□□ 2.8
SNRPA1P09661 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
SNRPA1P09661 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
SNRPA1P09661 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC32.55■■■□□ 2.8
SNRPA1P09661 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.55■■■□□ 2.8
SNRPA1P09661 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.55■■■□□ 2.8
SNRPA1P09661 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC32.55■■■□□ 2.8
SNRPA1P09661 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
SNRPA1P09661 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
SNRPA1P09661 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.54■■■□□ 2.8
SNRPA1P09661 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.54■■■□□ 2.8
SNRPA1P09661 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.54■■■□□ 2.8
SNRPA1P09661 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
SNRPA1P09661 AC126177.7-201ENST00000547904 679 ntBASIC32.53■■■□□ 2.8
SNRPA1P09661 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms