Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CAPN1P07384 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CAPN1P07384 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.87■■□□□ 1.57
CAPN1P07384 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
CAPN1P07384 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.86■■□□□ 1.57
CAPN1P07384 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.86■■□□□ 1.57
CAPN1P07384 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.86■■□□□ 1.57
CAPN1P07384 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CAPN1P07384 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.86■■□□□ 1.57
CAPN1P07384 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CAPN1P07384 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CAPN1P07384 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CAPN1P07384 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CAPN1P07384 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.84■■□□□ 1.57
CAPN1P07384 LINC01971-201ENST00000617888 1048 ntBASIC24.83■■□□□ 1.57
CAPN1P07384 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.83■■□□□ 1.57
CAPN1P07384 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CAPN1P07384 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
CAPN1P07384 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CAPN1P07384 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CAPN1P07384 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.82■■□□□ 1.56
CAPN1P07384 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.82■■□□□ 1.56
CAPN1P07384 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
CAPN1P07384 AC100797.4-201ENST00000631653 1827 ntBASIC24.82■■□□□ 1.56
CAPN1P07384 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
CAPN1P07384 DUX4L11-201ENST00000611504 1267 ntBASIC24.81■■□□□ 1.56
CAPN1P07384 DUX4L12-201ENST00000614593 1267 ntBASIC24.81■■□□□ 1.56
CAPN1P07384 DUX4L14-201ENST00000621227 1267 ntBASIC24.81■■□□□ 1.56
CAPN1P07384 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CAPN1P07384 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CAPN1P07384 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
CAPN1P07384 MIR3648-2-201ENST00000581792 180 ntBASIC24.8■■□□□ 1.56
CAPN1P07384 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.8■■□□□ 1.56
CAPN1P07384 MIR3648-1-201ENST00000615959 180 ntBASIC24.8■■□□□ 1.56
CAPN1P07384 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
CAPN1P07384 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CAPN1P07384 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.79■■□□□ 1.56
CAPN1P07384 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CAPN1P07384 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CAPN1P07384 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CAPN1P07384 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
CAPN1P07384 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CAPN1P07384 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
CAPN1P07384 MIR639-201ENST00000384974 98 ntBASIC24.77■■□□□ 1.56
CAPN1P07384 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.77■■□□□ 1.56
CAPN1P07384 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.77■■□□□ 1.56
CAPN1P07384 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.77■■□□□ 1.56
CAPN1P07384 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CAPN1P07384 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
CAPN1P07384 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.76■■□□□ 1.55
CAPN1P07384 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CAPN1P07384 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CAPN1P07384 BX255925.1-201ENST00000566954 1854 ntBASIC24.75■■□□□ 1.55
CAPN1P07384 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
CAPN1P07384 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.75■■□□□ 1.55
CAPN1P07384 AC016575.1-201ENST00000607026 382 ntBASIC24.75■■□□□ 1.55
CAPN1P07384 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.75■■□□□ 1.55
CAPN1P07384 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.74■■□□□ 1.55
CAPN1P07384 MIR4449-201ENST00000578365 66 ntBASIC24.74■■□□□ 1.55
CAPN1P07384 CR559946.2-201ENST00000623684 991 ntBASIC24.74■■□□□ 1.55
CAPN1P07384 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CAPN1P07384 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.74■■□□□ 1.55
CAPN1P07384 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CAPN1P07384 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
CAPN1P07384 AL121749.1-202ENST00000609313 2153 ntBASIC24.71■■□□□ 1.55
CAPN1P07384 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CAPN1P07384 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.71■■□□□ 1.55
CAPN1P07384 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CAPN1P07384 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CAPN1P07384 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.7■■□□□ 1.55
CAPN1P07384 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.7■■□□□ 1.54
CAPN1P07384 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CAPN1P07384 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
CAPN1P07384 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CAPN1P07384 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.69■■□□□ 1.54
CAPN1P07384 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CAPN1P07384 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CAPN1P07384 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
CAPN1P07384 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
CAPN1P07384 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CAPN1P07384 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CAPN1P07384 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.68■■□□□ 1.54
CAPN1P07384 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CAPN1P07384 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.68■■□□□ 1.54
CAPN1P07384 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CAPN1P07384 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CAPN1P07384 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CAPN1P07384 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.67■■□□□ 1.54
CAPN1P07384 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.67■■□□□ 1.54
CAPN1P07384 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
CAPN1P07384 LINC01003-201ENST00000564834 1764 ntBASIC24.67■■□□□ 1.54
CAPN1P07384 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CAPN1P07384 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.67■■□□□ 1.54
CAPN1P07384 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.66■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms