Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.89■■■□□ 2.54
CHGBP05060 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHGBP05060 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHGBP05060 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHGBP05060 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
CHGBP05060 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
CHGBP05060 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.86■■■□□ 2.53
CHGBP05060 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
CHGBP05060 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.86■■■□□ 2.53
CHGBP05060 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CHGBP05060 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
CHGBP05060 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
CHGBP05060 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.84■■■□□ 2.53
CHGBP05060 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
CHGBP05060 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGBP05060 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
CHGBP05060 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
CHGBP05060 HLA-V-202ENST00000446817 847 ntBASIC30.82■■■□□ 2.52
CHGBP05060 AC110285.7-201ENST00000624417 1536 ntBASIC30.82■■■□□ 2.52
CHGBP05060 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
CHGBP05060 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.8■■■□□ 2.52
CHGBP05060 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHGBP05060 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
CHGBP05060 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHGBP05060 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.79■■■□□ 2.52
CHGBP05060 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.79■■■□□ 2.52
CHGBP05060 DRD5P2-201ENST00000421395 2012 ntBASIC30.79■■■□□ 2.52
CHGBP05060 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.79■■■□□ 2.52
CHGBP05060 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGBP05060 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGBP05060 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGBP05060 AGPS-202ENST00000409888 815 ntTSL 4 BASIC30.77■■■□□ 2.52
CHGBP05060 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.77■■■□□ 2.52
CHGBP05060 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHGBP05060 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHGBP05060 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHGBP05060 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHGBP05060 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHGBP05060 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.75■■■□□ 2.51
CHGBP05060 MIR639-201ENST00000384974 98 ntBASIC30.74■■■□□ 2.51
CHGBP05060 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.73■■■□□ 2.51
CHGBP05060 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGBP05060 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGBP05060 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
CHGBP05060 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHGBP05060 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHGBP05060 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
CHGBP05060 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHGBP05060 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHGBP05060 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.5
CHGBP05060 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGBP05060 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGBP05060 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
CHGBP05060 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHGBP05060 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHGBP05060 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHGBP05060 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHGBP05060 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CHGBP05060 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHGBP05060 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHGBP05060 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.67■■■□□ 2.5
CHGBP05060 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.67■■■□□ 2.5
CHGBP05060 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHGBP05060 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGBP05060 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGBP05060 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHGBP05060 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGBP05060 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHGBP05060 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHGBP05060 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.63■■■□□ 2.49
CHGBP05060 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.63■■■□□ 2.49
CHGBP05060 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHGBP05060 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CHGBP05060 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.62■■■□□ 2.49
CHGBP05060 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHGBP05060 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.61■■■□□ 2.49
CHGBP05060 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHGBP05060 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.61■■■□□ 2.49
CHGBP05060 MIR4449-201ENST00000578365 66 ntBASIC30.61■■■□□ 2.49
CHGBP05060 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.61■■■□□ 2.49
CHGBP05060 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHGBP05060 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CHGBP05060 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
CHGBP05060 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CHGBP05060 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CHGBP05060 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
CHGBP05060 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.59■■■□□ 2.49
CHGBP05060 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CHGBP05060 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHGBP05060 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHGBP05060 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHGBP05060 AP002414.2-202ENST00000590929 1450 ntBASIC30.56■■■□□ 2.48
CHGBP05060 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHGBP05060 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
CHGBP05060 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
CHGBP05060 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHGBP05060 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHGBP05060 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.55■■■□□ 2.48
CHGBP05060 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHGBP05060 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms