Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
COL1A1P02452 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.08■■■□□ 2.57
COL1A1P02452 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.08■■■□□ 2.57
COL1A1P02452 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL1A1P02452 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
COL1A1P02452 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.56
COL1A1P02452 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
COL1A1P02452 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
COL1A1P02452 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.06■■■□□ 2.56
COL1A1P02452 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL1A1P02452 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
COL1A1P02452 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
COL1A1P02452 AC008813.1-201ENST00000536597 885 ntBASIC31.05■■■□□ 2.56
COL1A1P02452 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL1A1P02452 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL1A1P02452 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
COL1A1P02452 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.04■■■□□ 2.56
COL1A1P02452 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.04■■■□□ 2.56
COL1A1P02452 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
COL1A1P02452 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL1A1P02452 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.03■■■□□ 2.56
COL1A1P02452 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
COL1A1P02452 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.03■■■□□ 2.56
COL1A1P02452 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL1A1P02452 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
COL1A1P02452 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.01■■■□□ 2.56
COL1A1P02452 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
COL1A1P02452 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
COL1A1P02452 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
COL1A1P02452 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
COL1A1P02452 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
COL1A1P02452 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL1A1P02452 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.01■■■□□ 2.55
COL1A1P02452 AC148477.6-201ENST00000623746 465 ntBASIC31.01■■■□□ 2.55
COL1A1P02452 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
COL1A1P02452 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
COL1A1P02452 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
COL1A1P02452 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.99■■■□□ 2.55
COL1A1P02452 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.99■■■□□ 2.55
COL1A1P02452 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL1A1P02452 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.99■■■□□ 2.55
COL1A1P02452 AP004833.2-201ENST00000532228 1454 ntBASIC30.99■■■□□ 2.55
COL1A1P02452 AC100797.4-201ENST00000631653 1827 ntBASIC30.98■■■□□ 2.55
COL1A1P02452 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
COL1A1P02452 NTF6A-201ENST00000591175 560 ntBASIC30.97■■■□□ 2.55
COL1A1P02452 ABCB10P1-201ENST00000614297 2181 ntBASIC30.97■■■□□ 2.55
COL1A1P02452 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.97■■■□□ 2.55
COL1A1P02452 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL1A1P02452 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.97■■■□□ 2.55
COL1A1P02452 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
COL1A1P02452 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.96■■■□□ 2.55
COL1A1P02452 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
COL1A1P02452 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
COL1A1P02452 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC30.95■■■□□ 2.55
COL1A1P02452 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.95■■■□□ 2.55
COL1A1P02452 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
COL1A1P02452 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.95■■■□□ 2.54
COL1A1P02452 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.95■■■□□ 2.54
COL1A1P02452 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.95■■■□□ 2.54
COL1A1P02452 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
COL1A1P02452 AL139393.2-201ENST00000608721 2025 ntBASIC30.94■■■□□ 2.54
COL1A1P02452 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
COL1A1P02452 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.93■■■□□ 2.54
COL1A1P02452 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.92■■■□□ 2.54
COL1A1P02452 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL1A1P02452 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
COL1A1P02452 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.92■■■□□ 2.54
COL1A1P02452 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.91■■■□□ 2.54
COL1A1P02452 AC012354.3-201ENST00000623734 483 ntBASIC30.91■■■□□ 2.54
COL1A1P02452 AC022413.1-201ENST00000624602 984 ntBASIC30.91■■■□□ 2.54
COL1A1P02452 MIR219A2-201ENST00000608502 1504 ntBASIC30.91■■■□□ 2.54
COL1A1P02452 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL1A1P02452 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
COL1A1P02452 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.9■■■□□ 2.54
COL1A1P02452 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.9■■■□□ 2.54
COL1A1P02452 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL1A1P02452 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.9■■■□□ 2.54
COL1A1P02452 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
COL1A1P02452 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
COL1A1P02452 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL1A1P02452 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL1A1P02452 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.89■■■□□ 2.54
COL1A1P02452 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL1A1P02452 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
COL1A1P02452 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.89■■■□□ 2.53
COL1A1P02452 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
COL1A1P02452 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.87■■■□□ 2.53
COL1A1P02452 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
COL1A1P02452 AC060814.1-201ENST00000554326 538 ntBASIC30.85■■■□□ 2.53
COL1A1P02452 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL1A1P02452 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL1A1P02452 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
COL1A1P02452 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.84■■■□□ 2.53
COL1A1P02452 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
COL1A1P02452 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
COL1A1P02452 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL1A1P02452 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
COL1A1P02452 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
COL1A1P02452 ABCB10P3-201ENST00000561950 2166 ntBASIC30.81■■■□□ 2.52
COL1A1P02452 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.8■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms