Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 CAHM-201ENST00000604200 896 ntBASIC21.26■□□□□ 0.99
SPDEFO95238 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDEFO95238 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SPDEFO95238 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.26■□□□□ 0.99
SPDEFO95238 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDEFO95238 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.25■□□□□ 0.99
SPDEFO95238 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SPDEFO95238 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.25■□□□□ 0.99
SPDEFO95238 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SPDEFO95238 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDEFO95238 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
SPDEFO95238 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SPDEFO95238 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.24■□□□□ 0.99
SPDEFO95238 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SPDEFO95238 BX255925.1-201ENST00000566954 1854 ntBASIC21.23■□□□□ 0.99
SPDEFO95238 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPDEFO95238 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDEFO95238 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SPDEFO95238 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SPDEFO95238 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SPDEFO95238 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDEFO95238 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPDEFO95238 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC21.22■□□□□ 0.99
SPDEFO95238 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SPDEFO95238 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SPDEFO95238 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SPDEFO95238 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.21■□□□□ 0.99
SPDEFO95238 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDEFO95238 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDEFO95238 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDEFO95238 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SPDEFO95238 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SPDEFO95238 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.2■□□□□ 0.98
SPDEFO95238 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDEFO95238 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPDEFO95238 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SPDEFO95238 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.19■□□□□ 0.98
SPDEFO95238 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.18■□□□□ 0.98
SPDEFO95238 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SPDEFO95238 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SPDEFO95238 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.18■□□□□ 0.98
SPDEFO95238 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPDEFO95238 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPDEFO95238 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPDEFO95238 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.17■□□□□ 0.98
SPDEFO95238 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPDEFO95238 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPDEFO95238 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPDEFO95238 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDEFO95238 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDEFO95238 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SPDEFO95238 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPDEFO95238 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.15■□□□□ 0.98
SPDEFO95238 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPDEFO95238 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SPDEFO95238 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
SPDEFO95238 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.14■□□□□ 0.98
SPDEFO95238 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDEFO95238 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
SPDEFO95238 AC093323.1-202ENST00000635031 2045 ntBASIC21.14■□□□□ 0.97
SPDEFO95238 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDEFO95238 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SPDEFO95238 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.14■□□□□ 0.97
SPDEFO95238 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDEFO95238 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDEFO95238 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDEFO95238 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SPDEFO95238 AC020928.2-201ENST00000588717 2197 ntBASIC21.13■□□□□ 0.97
SPDEFO95238 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDEFO95238 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
SPDEFO95238 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SPDEFO95238 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDEFO95238 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SPDEFO95238 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SPDEFO95238 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDEFO95238 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SPDEFO95238 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.11■□□□□ 0.97
SPDEFO95238 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SPDEFO95238 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDEFO95238 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDEFO95238 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDEFO95238 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SPDEFO95238 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDEFO95238 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
SPDEFO95238 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SPDEFO95238 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.09■□□□□ 0.97
SPDEFO95238 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SPDEFO95238 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDEFO95238 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDEFO95238 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SPDEFO95238 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SPDEFO95238 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SPDEFO95238 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.07■□□□□ 0.96
SPDEFO95238 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SPDEFO95238 SUZ12P1-203ENST00000578195 985 ntBASIC21.07■□□□□ 0.96
SPDEFO95238 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SPDEFO95238 AC010864.1-201ENST00000609407 1511 ntBASIC21.07■□□□□ 0.96
SPDEFO95238 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.07■□□□□ 0.96
SPDEFO95238 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SPDEFO95238 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms