Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
KDM4BO94953 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.02■■□□□ 1.12
KDM4BO94953 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KDM4BO94953 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
KDM4BO94953 MIR762-201ENST00000390236 83 ntBASIC22.01■■□□□ 1.11
KDM4BO94953 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.01■■□□□ 1.11
KDM4BO94953 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KDM4BO94953 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KDM4BO94953 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
KDM4BO94953 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
KDM4BO94953 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
KDM4BO94953 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KDM4BO94953 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22■■□□□ 1.11
KDM4BO94953 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22■■□□□ 1.11
KDM4BO94953 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22■■□□□ 1.11
KDM4BO94953 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
KDM4BO94953 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
KDM4BO94953 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
KDM4BO94953 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KDM4BO94953 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.98■■□□□ 1.11
KDM4BO94953 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
KDM4BO94953 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
KDM4BO94953 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.98■■□□□ 1.11
KDM4BO94953 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
KDM4BO94953 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.97■■□□□ 1.11
KDM4BO94953 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
KDM4BO94953 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KDM4BO94953 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KDM4BO94953 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
KDM4BO94953 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
KDM4BO94953 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KDM4BO94953 AC127502.1-201ENST00000399971 1502 ntBASIC21.96■■□□□ 1.11
KDM4BO94953 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
KDM4BO94953 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.96■■□□□ 1.11
KDM4BO94953 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KDM4BO94953 LINC01003-201ENST00000564834 1764 ntBASIC21.96■■□□□ 1.11
KDM4BO94953 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
KDM4BO94953 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
KDM4BO94953 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.96■■□□□ 1.11
KDM4BO94953 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
KDM4BO94953 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM4BO94953 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
KDM4BO94953 SUZ12P1-203ENST00000578195 985 ntBASIC21.95■■□□□ 1.1
KDM4BO94953 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.95■■□□□ 1.1
KDM4BO94953 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.94■■□□□ 1.1
KDM4BO94953 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM4BO94953 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
KDM4BO94953 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KDM4BO94953 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.94■■□□□ 1.1
KDM4BO94953 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.93■■□□□ 1.1
KDM4BO94953 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
KDM4BO94953 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.93■■□□□ 1.1
KDM4BO94953 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KDM4BO94953 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.93■■□□□ 1.1
KDM4BO94953 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
KDM4BO94953 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDM4BO94953 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDM4BO94953 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
KDM4BO94953 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.92■■□□□ 1.1
KDM4BO94953 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM4BO94953 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.91■■□□□ 1.1
KDM4BO94953 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.91■■□□□ 1.1
KDM4BO94953 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
KDM4BO94953 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
KDM4BO94953 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
KDM4BO94953 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.9■■□□□ 1.1
KDM4BO94953 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
KDM4BO94953 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
KDM4BO94953 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
KDM4BO94953 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
KDM4BO94953 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.89■■□□□ 1.09
KDM4BO94953 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.89■■□□□ 1.09
KDM4BO94953 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.89■■□□□ 1.09
KDM4BO94953 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
KDM4BO94953 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KDM4BO94953 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.88■■□□□ 1.09
KDM4BO94953 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.88■■□□□ 1.09
KDM4BO94953 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.87■■□□□ 1.09
KDM4BO94953 AC005559.1-201ENST00000589661 871 ntBASIC21.87■■□□□ 1.09
KDM4BO94953 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KDM4BO94953 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
KDM4BO94953 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
KDM4BO94953 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
KDM4BO94953 AL449106.1-201ENST00000608517 1980 ntBASIC21.85■■□□□ 1.09
KDM4BO94953 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KDM4BO94953 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.85■■□□□ 1.09
KDM4BO94953 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.85■■□□□ 1.09
KDM4BO94953 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KDM4BO94953 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDM4BO94953 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KDM4BO94953 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
KDM4BO94953 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms