Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
SNRNP200O75643 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
SNRNP200O75643 AP004833.2-201ENST00000532228 1454 ntBASIC24.57■■□□□ 1.52
SNRNP200O75643 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.57■■□□□ 1.52
SNRNP200O75643 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SNRNP200O75643 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
SNRNP200O75643 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.56■■□□□ 1.52
SNRNP200O75643 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.56■■□□□ 1.52
SNRNP200O75643 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.56■■□□□ 1.52
SNRNP200O75643 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.55■■□□□ 1.52
SNRNP200O75643 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNRNP200O75643 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SNRNP200O75643 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.54■■□□□ 1.52
SNRNP200O75643 DRD5P2-201ENST00000421395 2012 ntBASIC24.53■■□□□ 1.52
SNRNP200O75643 MIR4449-201ENST00000578365 66 ntBASIC24.53■■□□□ 1.52
SNRNP200O75643 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRNP200O75643 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRNP200O75643 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRNP200O75643 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNRNP200O75643 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.52■■□□□ 1.52
SNRNP200O75643 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRNP200O75643 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
SNRNP200O75643 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.51■■□□□ 1.51
SNRNP200O75643 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
SNRNP200O75643 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.5■■□□□ 1.51
SNRNP200O75643 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.5■■□□□ 1.51
SNRNP200O75643 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SNRNP200O75643 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.49■■□□□ 1.51
SNRNP200O75643 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SNRNP200O75643 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SNRNP200O75643 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SNRNP200O75643 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.49■■□□□ 1.51
SNRNP200O75643 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNRNP200O75643 MIR639-201ENST00000384974 98 ntBASIC24.48■■□□□ 1.51
SNRNP200O75643 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.48■■□□□ 1.51
SNRNP200O75643 AC148477.6-201ENST00000623746 465 ntBASIC24.48■■□□□ 1.51
SNRNP200O75643 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNRNP200O75643 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SNRNP200O75643 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNRNP200O75643 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SNRNP200O75643 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.46■■□□□ 1.51
SNRNP200O75643 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
SNRNP200O75643 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNRNP200O75643 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNRNP200O75643 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.46■■□□□ 1.51
SNRNP200O75643 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
SNRNP200O75643 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SNRNP200O75643 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRNP200O75643 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRNP200O75643 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNRNP200O75643 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SNRNP200O75643 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRNP200O75643 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNRNP200O75643 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.43■■□□□ 1.5
SNRNP200O75643 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
SNRNP200O75643 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
SNRNP200O75643 AC110285.7-201ENST00000624417 1536 ntBASIC24.42■■□□□ 1.5
SNRNP200O75643 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SNRNP200O75643 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.42■■□□□ 1.5
SNRNP200O75643 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRNP200O75643 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRNP200O75643 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.41■■□□□ 1.5
SNRNP200O75643 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SNRNP200O75643 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.4■■□□□ 1.5
SNRNP200O75643 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.4■■□□□ 1.5
SNRNP200O75643 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SNRNP200O75643 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SNRNP200O75643 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.39■■□□□ 1.49
SNRNP200O75643 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.39■■□□□ 1.49
SNRNP200O75643 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.38■■□□□ 1.49
SNRNP200O75643 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SNRNP200O75643 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.38■■□□□ 1.49
SNRNP200O75643 AP002414.2-202ENST00000590929 1450 ntBASIC24.38■■□□□ 1.49
SNRNP200O75643 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRNP200O75643 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SNRNP200O75643 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SNRNP200O75643 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
SNRNP200O75643 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SNRNP200O75643 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
SNRNP200O75643 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
SNRNP200O75643 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SNRNP200O75643 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRNP200O75643 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRNP200O75643 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SNRNP200O75643 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRNP200O75643 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SNRNP200O75643 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
SNRNP200O75643 SRP68-213ENST00000629930 165 ntTSL 5 BASIC24.34■■□□□ 1.49
SNRNP200O75643 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SNRNP200O75643 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
SNRNP200O75643 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.33■■□□□ 1.49
SNRNP200O75643 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SNRNP200O75643 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.33■■□□□ 1.49
SNRNP200O75643 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms