Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.5■■■□□ 2.63
SMARCA5O60264 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.5■■■□□ 2.63
SMARCA5O60264 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA5O60264 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA5O60264 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
SMARCA5O60264 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCA5O60264 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.48■■■□□ 2.63
SMARCA5O60264 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA5O60264 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.47■■■□□ 2.63
SMARCA5O60264 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA5O60264 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.47■■■□□ 2.63
SMARCA5O60264 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCA5O60264 ZNRF2P2-203ENST00000454624 420 ntBASIC31.46■■■□□ 2.63
SMARCA5O60264 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
SMARCA5O60264 ABHD17AP4-201ENST00000411545 909 ntBASIC31.45■■■□□ 2.63
SMARCA5O60264 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.45■■■□□ 2.63
SMARCA5O60264 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.45■■■□□ 2.63
SMARCA5O60264 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA5O60264 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCA5O60264 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA5O60264 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SMARCA5O60264 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA5O60264 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SMARCA5O60264 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
SMARCA5O60264 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SMARCA5O60264 AP002414.2-202ENST00000590929 1450 ntBASIC31.41■■■□□ 2.62
SMARCA5O60264 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
SMARCA5O60264 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SMARCA5O60264 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA5O60264 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
SMARCA5O60264 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA5O60264 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
SMARCA5O60264 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
SMARCA5O60264 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SMARCA5O60264 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA5O60264 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC31.38■■■□□ 2.61
SMARCA5O60264 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA5O60264 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.37■■■□□ 2.61
SMARCA5O60264 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SMARCA5O60264 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
SMARCA5O60264 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.36■■■□□ 2.61
SMARCA5O60264 LINC01971-201ENST00000617888 1048 ntBASIC31.36■■■□□ 2.61
SMARCA5O60264 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA5O60264 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC31.36■■■□□ 2.61
SMARCA5O60264 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMARCA5O60264 AC110285.7-201ENST00000624417 1536 ntBASIC31.35■■■□□ 2.61
SMARCA5O60264 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.35■■■□□ 2.61
SMARCA5O60264 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.35■■■□□ 2.61
SMARCA5O60264 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA5O60264 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA5O60264 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMARCA5O60264 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.33■■■□□ 2.61
SMARCA5O60264 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.33■■■□□ 2.61
SMARCA5O60264 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
SMARCA5O60264 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
SMARCA5O60264 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.32■■■□□ 2.6
SMARCA5O60264 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SMARCA5O60264 DUX4L11-201ENST00000611504 1267 ntBASIC31.31■■■□□ 2.6
SMARCA5O60264 DUX4L12-201ENST00000614593 1267 ntBASIC31.31■■■□□ 2.6
SMARCA5O60264 DUX4L14-201ENST00000621227 1267 ntBASIC31.31■■■□□ 2.6
SMARCA5O60264 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.31■■■□□ 2.6
SMARCA5O60264 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
SMARCA5O60264 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA5O60264 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
SMARCA5O60264 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.29■■■□□ 2.6
SMARCA5O60264 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA5O60264 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.28■■■□□ 2.6
SMARCA5O60264 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
SMARCA5O60264 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA5O60264 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMARCA5O60264 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMARCA5O60264 LINC01003-201ENST00000564834 1764 ntBASIC31.26■■■□□ 2.59
SMARCA5O60264 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SMARCA5O60264 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
SMARCA5O60264 BX255925.1-201ENST00000566954 1854 ntBASIC31.25■■■□□ 2.59
SMARCA5O60264 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA5O60264 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L13-201ENST00000554103 1267 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L15-201ENST00000611059 1267 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L23-201ENST00000615195 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L24-201ENST00000617576 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L22-201ENST00000618238 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L20-201ENST00000619712 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L21-201ENST00000622058 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L10-201ENST00000622460 1267 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 DUX4L25-201ENST00000624915 1269 ntBASIC31.24■■■□□ 2.59
SMARCA5O60264 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA5O60264 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SMARCA5O60264 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA5O60264 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.22■■■□□ 2.59
SMARCA5O60264 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMARCA5O60264 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SMARCA5O60264 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
SMARCA5O60264 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.21■■■□□ 2.59
SMARCA5O60264 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.21■■■□□ 2.59
SMARCA5O60264 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA5O60264 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMARCA5O60264 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.2■■■□□ 2.59
SMARCA5O60264 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMARCA5O60264 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms