Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AL135925.1-201ENST00000605920 1701 ntBASIC22.71■■□□□ 1.23
CCL21O00585 KRT18P60-201ENST00000312876 1297 ntBASIC22.7■■□□□ 1.22
CCL21O00585 AC092296.2-201ENST00000589470 999 ntBASIC22.7■■□□□ 1.22
CCL21O00585 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCL21O00585 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
CCL21O00585 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCL21O00585 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCL21O00585 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.69■■□□□ 1.22
CCL21O00585 AC004987.1-201ENST00000428627 508 ntBASIC22.69■■□□□ 1.22
CCL21O00585 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCL21O00585 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCL21O00585 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCL21O00585 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCL21O00585 ECEL1P2-201ENST00000461596 1295 ntBASIC22.68■■□□□ 1.22
CCL21O00585 AC126177.7-201ENST00000547904 679 ntBASIC22.68■■□□□ 1.22
CCL21O00585 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.68■■□□□ 1.22
CCL21O00585 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCL21O00585 ATP5G2P3-201ENST00000429083 425 ntBASIC22.67■■□□□ 1.22
CCL21O00585 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCL21O00585 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCL21O00585 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.66■■□□□ 1.22
CCL21O00585 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCL21O00585 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCL21O00585 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCL21O00585 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.66■■□□□ 1.22
CCL21O00585 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCL21O00585 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCL21O00585 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCL21O00585 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCL21O00585 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCL21O00585 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CCL21O00585 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCL21O00585 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCL21O00585 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
CCL21O00585 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.63■■□□□ 1.21
CCL21O00585 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.63■■□□□ 1.21
CCL21O00585 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22.63■■□□□ 1.21
CCL21O00585 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22.63■■□□□ 1.21
CCL21O00585 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.63■■□□□ 1.21
CCL21O00585 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.62■■□□□ 1.21
CCL21O00585 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCL21O00585 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.62■■□□□ 1.21
CCL21O00585 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.62■■□□□ 1.21
CCL21O00585 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.62■■□□□ 1.21
CCL21O00585 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCL21O00585 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
CCL21O00585 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCL21O00585 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.6■■□□□ 1.21
CCL21O00585 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.6■■□□□ 1.21
CCL21O00585 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.59■■□□□ 1.21
CCL21O00585 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCL21O00585 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCL21O00585 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
CCL21O00585 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CCL21O00585 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.59■■□□□ 1.21
CCL21O00585 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCL21O00585 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.58■■□□□ 1.21
CCL21O00585 RARRES2P1-201ENST00000474487 481 ntBASIC22.58■■□□□ 1.21
CCL21O00585 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.58■■□□□ 1.21
CCL21O00585 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCL21O00585 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCL21O00585 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCL21O00585 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCL21O00585 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCL21O00585 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCL21O00585 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
CCL21O00585 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.56■■□□□ 1.2
CCL21O00585 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCL21O00585 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCL21O00585 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCL21O00585 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCL21O00585 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCL21O00585 MED25-210ENST00000612854 801 ntTSL 5 BASIC22.55■■□□□ 1.2
CCL21O00585 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CCL21O00585 MED25-214ENST00000622402 642 ntTSL 5 BASIC22.55■■□□□ 1.2
CCL21O00585 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCL21O00585 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.54■■□□□ 1.2
CCL21O00585 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCL21O00585 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.54■■□□□ 1.2
CCL21O00585 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCL21O00585 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.54■■□□□ 1.2
CCL21O00585 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCL21O00585 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCL21O00585 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CCL21O00585 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CCL21O00585 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
CCL21O00585 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CCL21O00585 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
CCL21O00585 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.51■■□□□ 1.19
CCL21O00585 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.51■■□□□ 1.19
CCL21O00585 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.51■■□□□ 1.19
CCL21O00585 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
CCL21O00585 AL157400.5-201ENST00000507624 621 ntBASIC22.49■■□□□ 1.19
CCL21O00585 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.49■■□□□ 1.19
CCL21O00585 AC007029.1-201ENST00000604183 313 ntBASIC22.49■■□□□ 1.19
CCL21O00585 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.49■■□□□ 1.19
CCL21O00585 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.49■■□□□ 1.19
CCL21O00585 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCL21O00585 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCL21O00585 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms