Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLIC1O00299 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLIC1O00299 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLIC1O00299 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLIC1O00299 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.92■■□□□ 1.42
CLIC1O00299 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
CLIC1O00299 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLIC1O00299 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.91■■□□□ 1.42
CLIC1O00299 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLIC1O00299 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLIC1O00299 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CLIC1O00299 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CLIC1O00299 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
CLIC1O00299 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CLIC1O00299 AC135983.2-203ENST00000454486 1613 ntBASIC23.89■■□□□ 1.42
CLIC1O00299 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CLIC1O00299 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.88■■□□□ 1.41
CLIC1O00299 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLIC1O00299 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLIC1O00299 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
CLIC1O00299 SUZ12P1-203ENST00000578195 985 ntBASIC23.88■■□□□ 1.41
CLIC1O00299 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLIC1O00299 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CLIC1O00299 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.88■■□□□ 1.41
CLIC1O00299 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.87■■□□□ 1.41
CLIC1O00299 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.87■■□□□ 1.41
CLIC1O00299 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CLIC1O00299 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CLIC1O00299 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLIC1O00299 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLIC1O00299 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLIC1O00299 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLIC1O00299 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CLIC1O00299 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CLIC1O00299 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CLIC1O00299 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CLIC1O00299 AC108673.1-201ENST00000510422 1159 ntBASIC23.85■■□□□ 1.41
CLIC1O00299 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLIC1O00299 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.84■■□□□ 1.41
CLIC1O00299 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.84■■□□□ 1.41
CLIC1O00299 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLIC1O00299 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.84■■□□□ 1.41
CLIC1O00299 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.84■■□□□ 1.41
CLIC1O00299 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.84■■□□□ 1.41
CLIC1O00299 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLIC1O00299 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.83■■□□□ 1.41
CLIC1O00299 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.83■■□□□ 1.41
CLIC1O00299 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CLIC1O00299 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLIC1O00299 WHAMMP2-203ENST00000563942 1603 ntBASIC23.81■■□□□ 1.4
CLIC1O00299 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLIC1O00299 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.81■■□□□ 1.4
CLIC1O00299 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLIC1O00299 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLIC1O00299 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.81■■□□□ 1.4
CLIC1O00299 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC1O00299 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC1O00299 MIR6090-201ENST00000622481 60 ntBASIC23.8■■□□□ 1.4
CLIC1O00299 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLIC1O00299 AC018358.1-201ENST00000631079 1402 ntBASIC23.79■■□□□ 1.4
CLIC1O00299 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC1O00299 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC1O00299 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC1O00299 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.77■■□□□ 1.4
CLIC1O00299 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CLIC1O00299 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLIC1O00299 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CLIC1O00299 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLIC1O00299 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
CLIC1O00299 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.76■■□□□ 1.39
CLIC1O00299 LINC00273-201ENST00000539813 1452 ntBASIC23.76■■□□□ 1.39
CLIC1O00299 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC1O00299 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC1O00299 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC1O00299 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CLIC1O00299 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CLIC1O00299 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC1O00299 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.75■■□□□ 1.39
CLIC1O00299 DUX4L28-201ENST00000623687 678 ntBASIC23.75■■□□□ 1.39
CLIC1O00299 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC1O00299 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC1O00299 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.74■■□□□ 1.39
CLIC1O00299 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC1O00299 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC1O00299 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CLIC1O00299 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC1O00299 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC1O00299 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.73■■□□□ 1.39
CLIC1O00299 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.73■■□□□ 1.39
CLIC1O00299 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC1O00299 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.72■■□□□ 1.39
CLIC1O00299 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CLIC1O00299 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC1O00299 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CLIC1O00299 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLIC1O00299 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLIC1O00299 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.71■■□□□ 1.39
CLIC1O00299 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLIC1O00299 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLIC1O00299 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms