Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.47■■■□□ 2.47
TMEM88BA6NKF7 AC133552.2-201ENST00000619106 1032 ntBASIC30.46■■■□□ 2.47
TMEM88BA6NKF7 AC110285.7-201ENST00000624417 1536 ntBASIC30.46■■■□□ 2.47
TMEM88BA6NKF7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
TMEM88BA6NKF7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TMEM88BA6NKF7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
TMEM88BA6NKF7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.45■■■□□ 2.47
TMEM88BA6NKF7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
TMEM88BA6NKF7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.45■■■□□ 2.46
TMEM88BA6NKF7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC30.44■■■□□ 2.46
TMEM88BA6NKF7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 AC126177.7-201ENST00000547904 679 ntBASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 AC009831.1-201ENST00000580420 1582 ntBASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 AC007029.1-201ENST00000604183 313 ntBASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.43■■■□□ 2.46
TMEM88BA6NKF7 RP9P-202ENST00000450133 1212 ntBASIC30.42■■■□□ 2.46
TMEM88BA6NKF7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
TMEM88BA6NKF7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC30.42■■■□□ 2.46
TMEM88BA6NKF7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 WHAMMP2-203ENST00000563942 1603 ntBASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
TMEM88BA6NKF7 GUSBP5-201ENST00000418136 578 ntBASIC30.4■■■□□ 2.46
TMEM88BA6NKF7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
TMEM88BA6NKF7 AC135983.2-203ENST00000454486 1613 ntBASIC30.4■■■□□ 2.46
TMEM88BA6NKF7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
TMEM88BA6NKF7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.39■■■□□ 2.46
TMEM88BA6NKF7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
TMEM88BA6NKF7 KRT8P33-201ENST00000508125 1423 ntBASIC30.39■■■□□ 2.45
TMEM88BA6NKF7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
TMEM88BA6NKF7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.38■■■□□ 2.45
TMEM88BA6NKF7 BHLHE23-202ENST00000612929 1109 ntBASIC30.38■■■□□ 2.45
TMEM88BA6NKF7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
TMEM88BA6NKF7 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TMEM88BA6NKF7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
TMEM88BA6NKF7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 AC010980.1-201ENST00000587192 1142 ntBASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 AC010864.1-201ENST00000609407 1511 ntBASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
TMEM88BA6NKF7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
TMEM88BA6NKF7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
TMEM88BA6NKF7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.35■■■□□ 2.45
TMEM88BA6NKF7 AL157400.5-201ENST00000507624 621 ntBASIC30.35■■■□□ 2.45
TMEM88BA6NKF7 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.35■■■□□ 2.45
TMEM88BA6NKF7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
TMEM88BA6NKF7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.34■■■□□ 2.45
TMEM88BA6NKF7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
TMEM88BA6NKF7 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.34■■■□□ 2.45
TMEM88BA6NKF7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.34■■■□□ 2.45
TMEM88BA6NKF7 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.34■■■□□ 2.45
TMEM88BA6NKF7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
TMEM88BA6NKF7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
TMEM88BA6NKF7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.33■■■□□ 2.45
TMEM88BA6NKF7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC30.33■■■□□ 2.45
TMEM88BA6NKF7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.45
TMEM88BA6NKF7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.32■■■□□ 2.45
TMEM88BA6NKF7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 REST-210ENST00000638187 1334 ntTSL 5 BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 AC074183.2-201ENST00000623112 922 ntBASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.32■■■□□ 2.44
TMEM88BA6NKF7 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TMEM88BA6NKF7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TMEM88BA6NKF7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC30.3■■■□□ 2.44
TMEM88BA6NKF7 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.29■■■□□ 2.44
TMEM88BA6NKF7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TMEM88BA6NKF7 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.29■■■□□ 2.44
TMEM88BA6NKF7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TMEM88BA6NKF7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TMEM88BA6NKF7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC30.28■■■□□ 2.44
TMEM88BA6NKF7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.28■■■□□ 2.44
TMEM88BA6NKF7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.28■■■□□ 2.44
TMEM88BA6NKF7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
TMEM88BA6NKF7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TMEM88BA6NKF7 YBX1P4-201ENST00000392794 808 ntBASIC30.27■■■□□ 2.44
TMEM88BA6NKF7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TMEM88BA6NKF7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.27■■■□□ 2.44
TMEM88BA6NKF7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.27■■■□□ 2.44
TMEM88BA6NKF7 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TMEM88BA6NKF7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TMEM88BA6NKF7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TMEM88BA6NKF7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.26■■■□□ 2.43
TMEM88BA6NKF7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TMEM88BA6NKF7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
TMEM88BA6NKF7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.25■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 717.9 ms