Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 AC010864.1-201ENST00000609407 1511 ntBASIC20.79■□□□□ 0.92
RNF222A6NCQ9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 AP004833.2-201ENST00000532228 1454 ntBASIC20.78■□□□□ 0.92
RNF222A6NCQ9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF222A6NCQ9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF222A6NCQ9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF222A6NCQ9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF222A6NCQ9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF222A6NCQ9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF222A6NCQ9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF222A6NCQ9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF222A6NCQ9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF222A6NCQ9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF222A6NCQ9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF222A6NCQ9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF222A6NCQ9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF222A6NCQ9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF222A6NCQ9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF222A6NCQ9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF222A6NCQ9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RNF222A6NCQ9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF222A6NCQ9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF222A6NCQ9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF222A6NCQ9 DUSP8P4-201ENST00000399538 1761 ntBASIC20.64■□□□□ 0.89
RNF222A6NCQ9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF222A6NCQ9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF222A6NCQ9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF222A6NCQ9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF222A6NCQ9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF222A6NCQ9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF222A6NCQ9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF222A6NCQ9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms