Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF222A6NCQ9 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 AC010864.1-201ENST00000609407 1511 ntBASIC20.79■□□□□ 0.92
RNF222A6NCQ9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF222A6NCQ9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 AP004833.2-201ENST00000532228 1454 ntBASIC20.78■□□□□ 0.92
RNF222A6NCQ9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF222A6NCQ9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF222A6NCQ9 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF222A6NCQ9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF222A6NCQ9 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF222A6NCQ9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF222A6NCQ9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF222A6NCQ9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RNF222A6NCQ9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RNF222A6NCQ9 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF222A6NCQ9 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RNF222A6NCQ9 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RNF222A6NCQ9 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RNF222A6NCQ9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF222A6NCQ9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF222A6NCQ9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RNF222A6NCQ9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF222A6NCQ9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF222A6NCQ9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF222A6NCQ9 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF222A6NCQ9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RNF222A6NCQ9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF222A6NCQ9 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.66■□□□□ 0.9
RNF222A6NCQ9 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
RNF222A6NCQ9 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
RNF222A6NCQ9 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF222A6NCQ9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF222A6NCQ9 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF222A6NCQ9 DUSP8P4-201ENST00000399538 1761 ntBASIC20.64■□□□□ 0.89
RNF222A6NCQ9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF222A6NCQ9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF222A6NCQ9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF222A6NCQ9 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF222A6NCQ9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF222A6NCQ9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RNF222A6NCQ9 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF222A6NCQ9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RNF222A6NCQ9 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF222A6NCQ9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF222A6NCQ9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms