Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV5A0A0B4J249 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV5A0A0B4J249 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 AL449106.1-201ENST00000608517 1980 ntBASIC19.66■□□□□ 0.74
TRAV5A0A0B4J249 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.65■□□□□ 0.74
TRAV5A0A0B4J249 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV5A0A0B4J249 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV5A0A0B4J249 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV5A0A0B4J249 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRAV5A0A0B4J249 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.64■□□□□ 0.74
TRAV5A0A0B4J249 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV5A0A0B4J249 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV5A0A0B4J249 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV5A0A0B4J249 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TRAV5A0A0B4J249 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV5A0A0B4J249 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV5A0A0B4J249 AL391121.1-201ENST00000607967 1349 ntBASIC19.63■□□□□ 0.73
TRAV5A0A0B4J249 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV5A0A0B4J249 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV5A0A0B4J249 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV5A0A0B4J249 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV5A0A0B4J249 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TRAV5A0A0B4J249 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.61■□□□□ 0.73
TRAV5A0A0B4J249 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV5A0A0B4J249 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV5A0A0B4J249 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV5A0A0B4J249 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV5A0A0B4J249 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV5A0A0B4J249 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV5A0A0B4J249 CAHM-201ENST00000604200 896 ntBASIC19.59■□□□□ 0.73
TRAV5A0A0B4J249 AP002414.2-202ENST00000590929 1450 ntBASIC19.59■□□□□ 0.73
TRAV5A0A0B4J249 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV5A0A0B4J249 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV5A0A0B4J249 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV5A0A0B4J249 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV5A0A0B4J249 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV5A0A0B4J249 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV5A0A0B4J249 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV5A0A0B4J249 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV5A0A0B4J249 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV5A0A0B4J249 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV5A0A0B4J249 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV5A0A0B4J249 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV5A0A0B4J249 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC19.55■□□□□ 0.72
TRAV5A0A0B4J249 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRAV5A0A0B4J249 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV5A0A0B4J249 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
TRAV5A0A0B4J249 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV5A0A0B4J249 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV5A0A0B4J249 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV5A0A0B4J249 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV5A0A0B4J249 AC091060.1-201ENST00000623524 1766 ntBASIC19.52■□□□□ 0.71
TRAV5A0A0B4J249 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV5A0A0B4J249 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV5A0A0B4J249 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV5A0A0B4J249 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.5■□□□□ 0.71
TRAV5A0A0B4J249 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV5A0A0B4J249 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV5A0A0B4J249 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TRAV5A0A0B4J249 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV5A0A0B4J249 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV5A0A0B4J249 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV5A0A0B4J249 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 AC136428.2-201ENST00000563187 214 ntBASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV5A0A0B4J249 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TRAV5A0A0B4J249 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV5A0A0B4J249 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV5A0A0B4J249 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.46■□□□□ 0.71
TRAV5A0A0B4J249 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV5A0A0B4J249 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TRAV5A0A0B4J249 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms