Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 NDUFV2-AS1-203ENST00000608008 779 ntBASIC25.02■■□□□ 1.6
SPG7Q9UQ90 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC25.02■■□□□ 1.6
SPG7Q9UQ90 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SPG7Q9UQ90 AC092667.1-201ENST00000434301 2586 ntBASIC25■■□□□ 1.59
SPG7Q9UQ90 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SPG7Q9UQ90 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 SPDYE13P-201ENST00000445314 798 ntBASIC25■■□□□ 1.59
SPG7Q9UQ90 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25■■□□□ 1.59
SPG7Q9UQ90 CLEC4GP1-201ENST00000596555 870 ntBASIC25■■□□□ 1.59
SPG7Q9UQ90 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
SPG7Q9UQ90 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC25■■□□□ 1.59
SPG7Q9UQ90 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SPG7Q9UQ90 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC25■■□□□ 1.59
SPG7Q9UQ90 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC25■■□□□ 1.59
SPG7Q9UQ90 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25■■□□□ 1.59
SPG7Q9UQ90 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25■■□□□ 1.59
SPG7Q9UQ90 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 HBZP1-201ENST00000354915 429 ntBASIC24.99■■□□□ 1.59
SPG7Q9UQ90 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 TCF3P1-201ENST00000423021 1937 ntBASIC24.99■■□□□ 1.59
SPG7Q9UQ90 AL450487.1-201ENST00000426799 995 ntBASIC24.99■■□□□ 1.59
SPG7Q9UQ90 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
SPG7Q9UQ90 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 SDHAP1-207ENST00000440850 2000 ntBASIC24.98■■□□□ 1.59
SPG7Q9UQ90 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 GPAT2P1-201ENST00000444924 1672 ntBASIC24.98■■□□□ 1.59
SPG7Q9UQ90 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG7Q9UQ90 RASA4DP-201ENST00000460726 1199 ntBASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms