Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 IKBKGP1-201ENST00000612193 1073 ntBASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 AC092437.1-201ENST00000624794 1048 ntBASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGB4Q9UN71 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 MIR663A-201ENST00000385250 93 ntBASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 AC116351.2-201ENST00000606540 1585 ntBASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDHGB4Q9UN71 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 AC135050.7-201ENST00000624508 2218 ntBASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PCDHGB4Q9UN71 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 AL050303.2-201ENST00000619798 666 ntBASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PCDHGB4Q9UN71 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB4Q9UN71 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB4Q9UN71 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
PCDHGB4Q9UN71 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms