Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHMP4BQ9H444 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CHMP4BQ9H444 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC24.14■■□□□ 1.46
CHMP4BQ9H444 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC24.14■■□□□ 1.46
CHMP4BQ9H444 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHMP4BQ9H444 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CHMP4BQ9H444 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 KRT18P29-201ENST00000397031 1267 ntBASIC24.14■■□□□ 1.45
CHMP4BQ9H444 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CHMP4BQ9H444 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 KRT8P41-201ENST00000533985 1514 ntBASIC24.13■■□□□ 1.45
CHMP4BQ9H444 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.13■■□□□ 1.45
CHMP4BQ9H444 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHMP4BQ9H444 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 AL135905.2-201ENST00000584934 1404 ntBASIC24.12■■□□□ 1.45
CHMP4BQ9H444 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 Z85996.1-201ENST00000494644 937 ntBASIC24.12■■□□□ 1.45
CHMP4BQ9H444 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 FAM197Y4-202ENST00000622692 608 ntBASIC24.12■■□□□ 1.45
CHMP4BQ9H444 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 AC120498.9-201ENST00000339021 3867 ntBASIC24.12■■□□□ 1.45
CHMP4BQ9H444 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CHMP4BQ9H444 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 AC087289.5-201ENST00000586076 3175 ntBASIC24.11■■□□□ 1.45
CHMP4BQ9H444 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 TSPY23P-201ENST00000440136 739 ntBASIC24.11■■□□□ 1.45
CHMP4BQ9H444 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.11■■□□□ 1.45
CHMP4BQ9H444 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 AC026271.3-201ENST00000571884 352 ntBASIC24.11■■□□□ 1.45
CHMP4BQ9H444 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 AL359736.2-201ENST00000621992 437 ntBASIC24.11■■□□□ 1.45
CHMP4BQ9H444 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC24.11■■□□□ 1.45
CHMP4BQ9H444 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC24.1■■□□□ 1.45
CHMP4BQ9H444 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.1■■□□□ 1.45
CHMP4BQ9H444 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHMP4BQ9H444 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms