Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LCE3DQ9BYE3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AC068880.1-201ENST00000507289 2297 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AL354751.1-201ENST00000412768 1863 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AC007322.3-201ENST00000426526 701 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 IGHV3-19-201ENST00000521488 291 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AC233992.3-201ENST00000607491 485 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 AC244517.3-201ENST00000616254 1235 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 MKRN4P-201ENST00000444706 1521 ntBASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC5.16□□□□□ -1.58
LCE3DQ9BYE3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms