Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TMEM54Q969K7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM54Q969K7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM54Q969K7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 MESTP1-201ENST00000404287 994 ntBASIC16.88■□□□□ 0.29
TMEM54Q969K7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 B3GAT3P1-201ENST00000471720 806 ntBASIC16.88■□□□□ 0.29
TMEM54Q969K7 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TMEM54Q969K7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM54Q969K7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 AC098818.2-201ENST00000564925 2320 ntBASIC16.87■□□□□ 0.29
TMEM54Q969K7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 FSCN1P1-201ENST00000568912 1481 ntBASIC16.87■□□□□ 0.29
TMEM54Q969K7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 AC008550.1-201ENST00000511500 884 ntBASIC16.87■□□□□ 0.29
TMEM54Q969K7 PRSS44-201ENST00000515154 1146 ntBASIC16.87■□□□□ 0.29
TMEM54Q969K7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM54Q969K7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM54Q969K7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 FAM207BP-201ENST00000447172 505 ntBASIC16.86■□□□□ 0.29
TMEM54Q969K7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 AC116562.2-201ENST00000507042 360 ntBASIC16.86■□□□□ 0.29
TMEM54Q969K7 NUDT16P1-203ENST00000513809 620 ntBASIC16.86■□□□□ 0.29
TMEM54Q969K7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC16.86■□□□□ 0.29
TMEM54Q969K7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM54Q969K7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms