Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 AC092368.3-202ENST00000574180 1591 ntBASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RTN4IP1Q8WWV3 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 AC060766.5-201ENST00000590539 871 ntBASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RTN4IP1Q8WWV3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 HTR7P1-202ENST00000624664 4411 ntBASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 TEX21P-204ENST00000641479 1693 ntBASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RTN4IP1Q8WWV3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RTN4IP1Q8WWV3 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms