Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 FP475955.4-201ENST00000623131 1990 ntBASIC17.92■□□□□ 0.46
NUP43Q8NFH3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 TSPY20P-201ENST00000450910 630 ntBASIC17.92■□□□□ 0.46
NUP43Q8NFH3 RPPH1-201ENST00000516869 333 ntBASIC17.92■□□□□ 0.46
NUP43Q8NFH3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
NUP43Q8NFH3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 AC004408.2-201ENST00000623613 2777 ntBASIC17.91■□□□□ 0.46
NUP43Q8NFH3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 HTR7P1-201ENST00000538670 1336 ntBASIC17.91■□□□□ 0.46
NUP43Q8NFH3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.91■□□□□ 0.46
NUP43Q8NFH3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NUP43Q8NFH3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 KRT18P29-201ENST00000397031 1267 ntBASIC17.9■□□□□ 0.46
NUP43Q8NFH3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
NUP43Q8NFH3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
NUP43Q8NFH3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.89■□□□□ 0.46
NUP43Q8NFH3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 ITM2C-210ENST00000620962 501 ntBASIC17.89■□□□□ 0.45
NUP43Q8NFH3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 FEM1AP3-201ENST00000403722 1741 ntBASIC17.89■□□□□ 0.45
NUP43Q8NFH3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.89■□□□□ 0.45
NUP43Q8NFH3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUP43Q8NFH3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.88■□□□□ 0.45
NUP43Q8NFH3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
NUP43Q8NFH3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
NUP43Q8NFH3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
NUP43Q8NFH3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms