Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CCDC197Q8NCU1 ZNF815P-204ENST00000434898 1737 ntBASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.02■□□□□ 0.63
CCDC197Q8NCU1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC197Q8NCU1 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 RARRES2P1-201ENST00000474487 481 ntBASIC19■□□□□ 0.63
CCDC197Q8NCU1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 AC012414.1-201ENST00000556676 535 ntBASIC19■□□□□ 0.63
CCDC197Q8NCU1 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 GNAS-203ENST00000306120 1878 ntBASIC19■□□□□ 0.63
CCDC197Q8NCU1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19■□□□□ 0.63
CCDC197Q8NCU1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC197Q8NCU1 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 CCDC92B-201ENST00000575506 885 ntBASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 AC008764.7-201ENST00000593779 1081 ntBASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CCDC197Q8NCU1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms