Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 HLA-G-202ENST00000376815 851 ntBASIC12.66□□□□□ -0.38
SCXQ7RTU7 HLA-G-203ENST00000376818 1127 ntBASIC12.66□□□□□ -0.38
SCXQ7RTU7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 AC211429.1-201ENST00000415277 523 ntBASIC12.66□□□□□ -0.38
SCXQ7RTU7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 LINC01023-201ENST00000606054 436 ntBASIC12.66□□□□□ -0.38
SCXQ7RTU7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SCXQ7RTU7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SCXQ7RTU7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 PNN-205ENST00000556530 601 ntTSL 2 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC12.65□□□□□ -0.38
SCXQ7RTU7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SCXQ7RTU7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
SCXQ7RTU7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.65□□□□□ -0.39
SCXQ7RTU7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SCXQ7RTU7 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 HTR7P1-201ENST00000538670 1336 ntBASIC12.64□□□□□ -0.39
SCXQ7RTU7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SCXQ7RTU7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SCXQ7RTU7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms