Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 AC093503.3-201ENST00000624917 2352 ntBASIC20.07■□□□□ 0.8
RNF43Q68DV7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RNF43Q68DV7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF43Q68DV7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF43Q68DV7 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF43Q68DV7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 MESTP1-201ENST00000404287 994 ntBASIC20.06■□□□□ 0.8
RNF43Q68DV7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RNF43Q68DV7 AC093484.2-201ENST00000580996 2166 ntBASIC20.06■□□□□ 0.8
RNF43Q68DV7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF43Q68DV7 AC145285.6-201ENST00000604632 637 ntBASIC20.06■□□□□ 0.8
RNF43Q68DV7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF43Q68DV7 REXO1L10P-201ENST00000615707 1290 ntBASIC20.06■□□□□ 0.8
RNF43Q68DV7 HLA-A-209ENST00000638375 975 ntBASIC20.06■□□□□ 0.8
RNF43Q68DV7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF43Q68DV7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF43Q68DV7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 NEFHP1-201ENST00000412845 2629 ntBASIC20.05■□□□□ 0.8
RNF43Q68DV7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 AC004980.1-204ENST00000429707 299 ntBASIC20.05■□□□□ 0.8
RNF43Q68DV7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.05■□□□□ 0.8
RNF43Q68DV7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF43Q68DV7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF43Q68DV7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 AC005521.1-201ENST00000393351 872 ntBASIC20.04■□□□□ 0.8
RNF43Q68DV7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.04■□□□□ 0.8
RNF43Q68DV7 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
RNF43Q68DV7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF43Q68DV7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms