Protein–RNA interactions for Protein: Q53SF7

COBLL1, Cordon-bleu protein-like 1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COBLL1Q53SF7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
COBLL1Q53SF7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 AC128676.1-201ENST00000454392 318 ntBASIC21.02■□□□□ 0.96
COBLL1Q53SF7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.02■□□□□ 0.96
COBLL1Q53SF7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COBLL1Q53SF7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
COBLL1Q53SF7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COBLL1Q53SF7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
COBLL1Q53SF7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.01■□□□□ 0.95
COBLL1Q53SF7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 CD99P1-205ENST00000527459 561 ntBASIC21.01■□□□□ 0.95
COBLL1Q53SF7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
COBLL1Q53SF7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21■□□□□ 0.95
COBLL1Q53SF7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21■□□□□ 0.95
COBLL1Q53SF7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21■□□□□ 0.95
COBLL1Q53SF7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21■□□□□ 0.95
COBLL1Q53SF7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 KSR1P1-201ENST00000446298 240 ntBASIC21■□□□□ 0.95
COBLL1Q53SF7 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21■□□□□ 0.95
COBLL1Q53SF7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21■□□□□ 0.95
COBLL1Q53SF7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21■□□□□ 0.95
COBLL1Q53SF7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 AC131212.4-201ENST00000623606 975 ntBASIC21■□□□□ 0.95
COBLL1Q53SF7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21■□□□□ 0.95
COBLL1Q53SF7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21■□□□□ 0.95
COBLL1Q53SF7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
COBLL1Q53SF7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COBLL1Q53SF7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COBLL1Q53SF7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.99■□□□□ 0.95
COBLL1Q53SF7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COBLL1Q53SF7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COBLL1Q53SF7 KRT8P11-201ENST00000409686 1436 ntBASIC20.99■□□□□ 0.95
COBLL1Q53SF7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COBLL1Q53SF7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms