Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 RASA4DP-201ENST00000460726 1199 ntBASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 SDHAP1-207ENST00000440850 2000 ntBASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRIM71Q2Q1W2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM71Q2Q1W2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM71Q2Q1W2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM71Q2Q1W2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM71Q2Q1W2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 AL137060.1-201ENST00000618151 2648 ntBASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 TSPY21P-201ENST00000433481 731 ntBASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM71Q2Q1W2 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 AC092667.1-201ENST00000434301 2586 ntBASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM71Q2Q1W2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 TCF3P1-201ENST00000423021 1937 ntBASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 AL023284.2-201ENST00000405850 579 ntBASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 AC026396.1-201ENST00000419388 421 ntBASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM71Q2Q1W2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM71Q2Q1W2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms