Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TAZ-220ENST00000615986 1900 ntTSL 220.7■□□□□ 0.92e-7■□□□□ 10.7
LSM11P83369 ARHGEF16-207ENST00000485984 2340 ntTSL 216.68■□□□□ 0.262e-7■□□□□ 10.7
LSM11P83369 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.67■□□□□ 0.12e-7■□□□□ 10.7
LSM11P83369 TAZ-211ENST00000494912 2286 ntTSL 215.38■□□□□ 0.052e-7■□□□□ 10.7
LSM11P83369 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.025e-6■□□□□ 10.7
LSM11P83369 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.035e-6■□□□□ 10.7
LSM11P83369 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.092e-7■□□□□ 10.7
LSM11P83369 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.12e-7■□□□□ 10.7
LSM11P83369 MRNIP-221ENST00000523267 741 ntTSL 314.32□□□□□ -0.125e-6■□□□□ 10.7
LSM11P83369 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.125e-6■□□□□ 10.7
LSM11P83369 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.09□□□□□ -0.155e-6■□□□□ 10.7
LSM11P83369 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.93□□□□□ -0.185e-6■□□□□ 10.7
LSM11P83369 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.245e-6■□□□□ 10.7
LSM11P83369 MRNIP-219ENST00000522663 2879 ntTSL 1 (best)11.79□□□□□ -0.525e-6■□□□□ 10.7
LSM11P83369 MRNIP-206ENST00000518950 558 ntTSL 411.22□□□□□ -0.615e-6■□□□□ 10.7
LSM11P83369 TAZ-212ENST00000498029 537 ntTSL 210.97□□□□□ -0.652e-7■□□□□ 10.7
LSM11P83369 MRNIP-204ENST00000518219 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.025e-6■□□□□ 10.7
LSM11P83369 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.16■□□□□ 0.663e-6■□□□□ 10.7
LSM11P83369 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC11.36□□□□□ -0.593e-6■□□□□ 10.7
LSM11P83369 MBNL3-207ENST00000421707 946 ntTSL 510.94□□□□□ -0.663e-6■□□□□ 10.7
LSM11P83369 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.81□□□□□ -13e-6■□□□□ 10.7
LSM11P83369 MBNL3-208ENST00000436215 891 ntTSL 38.06□□□□□ -1.123e-6■□□□□ 10.7
LSM11P83369 MBNL3-211ENST00000473364 780 ntTSL 38.05□□□□□ -1.123e-6■□□□□ 10.7
LSM11P83369 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.56□□□□□ -1.523e-6■□□□□ 10.7
LSM11P83369 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.723e-6■□□□□ 10.7
LSM11P83369 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.72□□□□□ -1.973e-6■□□□□ 10.7
LSM11P83369 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.7□□□□□ -2.143e-6■□□□□ 10.7
LSM11P83369 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.142e-6■□□□□ 10.7
LSM11P83369 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.185e-8■□□□□ 10.7
LSM11P83369 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.455e-8■□□□□ 10.7
LSM11P83369 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.062e-10■□□□□ 10.7
LSM11P83369 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.332e-10■□□□□ 10.7
LSM11P83369 STAT2-207ENST00000556539 3278 ntTSL 1 (best)11.52□□□□□ -0.572e-10■□□□□ 10.7
LSM11P83369 HAUS5-206ENST00000587439 2758 ntTSL 216.14■□□□□ 0.179e-7■□□□□ 10.7
LSM11P83369 HAUS5-205ENST00000585968 2762 ntTSL 1 (best)15.28■□□□□ 0.049e-7■□□□□ 10.7
LSM11P83369 HAUS5-208ENST00000590994 883 ntTSL 512.16□□□□□ -0.469e-7■□□□□ 10.7
LSM11P83369 HAUS5-202ENST00000424522 4462 ntTSL 511.39□□□□□ -0.599e-7■□□□□ 10.7
LSM11P83369 HAUS5-203ENST00000428854 4387 ntTSL 510.93□□□□□ -0.669e-7■□□□□ 10.7
LSM11P83369 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.719e-7■□□□□ 10.7
LSM11P83369 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.224e-7■□□□□ 10.7
LSM11P83369 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.54e-7■□□□□ 10.7
LSM11P83369 PLXNB1-218ENST00000485535 3264 ntTSL 211.7□□□□□ -0.544e-7■□□□□ 10.7
LSM11P83369 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.392e-6■□□□□ 10.6
LSM11P83369 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.332e-6■□□□□ 10.6
LSM11P83369 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.112e-6■□□□□ 10.6
LSM11P83369 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.132e-6■□□□□ 10.6
LSM11P83369 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.152e-6■□□□□ 10.6
LSM11P83369 C21orf58-208ENST00000472607 713 ntTSL 313.2□□□□□ -0.32e-6■□□□□ 10.6
LSM11P83369 C21orf58-206ENST00000417060 1072 ntAPPRIS ALT2 TSL 1 (best)12.51□□□□□ -0.412e-6■□□□□ 10.6
LSM11P83369 C21orf58-210ENST00000491666 1196 ntTSL 512.51□□□□□ -0.412e-6■□□□□ 10.6
LSM11P83369 NBR2-203ENST00000467245 1158 ntTSL 2 BASIC11.82□□□□□ -0.523e-7■□□□□ 10.6
LSM11P83369 NBR2-201ENST00000356906 978 ntTSL 1 (best)11.66□□□□□ -0.543e-7■□□□□ 10.6
LSM11P83369 IPO4-203ENST00000558046 3440 ntTSL 211.44□□□□□ -0.586e-6■□□□□ 10.6
LSM11P83369 IPO4-218ENST00000561199 3249 ntTSL 211.37□□□□□ -0.596e-6■□□□□ 10.6
LSM11P83369 IPO4-207ENST00000558780 3540 ntTSL 211.34□□□□□ -0.596e-6■□□□□ 10.6
LSM11P83369 IPO4-214ENST00000560798 3581 ntTSL 211.31□□□□□ -0.66e-6■□□□□ 10.6
LSM11P83369 IPO4-211ENST00000560155 3485 ntTSL 1 (best)11.01□□□□□ -0.656e-6■□□□□ 10.6
LSM11P83369 NBR2-202ENST00000460115 1344 ntTSL 2 BASIC10.74□□□□□ -0.693e-7■□□□□ 10.6
LSM11P83369 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.696e-6■□□□□ 10.6
LSM11P83369 IPO4-217ENST00000561090 3632 ntTSL 210.61□□□□□ -0.716e-6■□□□□ 10.6
LSM11P83369 IPO4-201ENST00000354464 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.756e-6■□□□□ 10.6
LSM11P83369 IPO4-209ENST00000559588 3537 ntTSL 1 (best)10.01□□□□□ -0.816e-6■□□□□ 10.6
LSM11P83369 PILRB-212ENST00000608825 587 ntAPPRIS ALT2 TSL 39.6□□□□□ -0.873e-7■□□□□ 10.6
LSM11P83369 PILRB-205ENST00000438231 603 ntTSL 39.49□□□□□ -0.893e-7■□□□□ 10.6
LSM11P83369 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.671e-8■□□□□ 10.6
LSM11P83369 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.581e-8■□□□□ 10.6
LSM11P83369 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.48■□□□□ 0.071e-8■□□□□ 10.6
LSM11P83369 EIF6-205ENST00000440766 798 ntTSL 214.3□□□□□ -0.121e-8■□□□□ 10.6
LSM11P83369 EIF6-206ENST00000447927 932 ntTSL 1 (best)14.3□□□□□ -0.121e-8■□□□□ 10.6
LSM11P83369 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.151e-8■□□□□ 10.6
LSM11P83369 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.231e-8■□□□□ 10.6
LSM11P83369 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.18■■□□□ 1.33e-9■□□□□ 10.6
LSM11P83369 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.26■□□□□ 0.353e-9■□□□□ 10.6
LSM11P83369 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.263e-9■□□□□ 10.6
LSM11P83369 CTSA-207ENST00000484855 2183 ntTSL 1 (best)15.47■□□□□ 0.073e-9■□□□□ 10.6
LSM11P83369 CTSA-214ENST00000606788 3056 ntTSL 215.09■□□□□ 0.013e-9■□□□□ 10.6
LSM11P83369 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.26□□□□□ -0.133e-9■□□□□ 10.6
LSM11P83369 CTSA-210ENST00000606000 644 ntTSL 310.71□□□□□ -0.693e-9■□□□□ 10.6
LSM11P83369 CTBP2-207ENST00000467395 410 ntTSL 321.86■■□□□ 1.096e-6■□□□□ 10.6
LSM11P83369 KMT5A-209ENST00000537270 352 ntTSL 515.08■□□□□ 09e-8■□□□□ 10.6
LSM11P83369 FARP1-230ENST00000600380 510 ntTSL 310.62□□□□□ -0.712e-28■□□□□ 10.6
LSM11P83369 VEGFA-217ENST00000518538 535 ntTSL 219.36■□□□□ 0.692e-28■□□□□ 10.6
LSM11P83369 NDUFV1-210ENST00000527923 594 ntTSL 217.05■□□□□ 0.328e-8■□□□□ 10.6
LSM11P83369 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.91□□□□□ -0.184e-29■□□□□ 10.6
LSM11P83369 SNHG22-202ENST00000615535 421 nt13.46□□□□□ -0.254e-29■□□□□ 10.6
LSM11P83369 SCARNA17-201ENST00000516183 144 ntBASIC-0.5□□□□□ -2.494e-29■□□□□ 10.6
LSM11P83369 LRRC75B-204ENST00000460524 2276 ntTSL 527.07■■□□□ 1.921e-5■□□□□ 10.6
LSM11P83369 LRRC75B-203ENST00000446942 1828 ntTSL 525.79■■□□□ 1.721e-5■□□□□ 10.6
LSM11P83369 LRRC75B-202ENST00000404045 1417 ntTSL 324.68■■□□□ 1.541e-5■□□□□ 10.6
LSM11P83369 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.41e-5■□□□□ 10.6
LSM11P83369 MCRIP2-202ENST00000474840 702 ntTSL 1 (best)23.29■■□□□ 1.321e-5■□□□□ 10.6
LSM11P83369 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.991e-5■□□□□ 10.6
LSM11P83369 LRRC75B-207ENST00000491910 2943 ntTSL 220.94■□□□□ 0.941e-5■□□□□ 10.6
LSM11P83369 MCRIP2-203ENST00000491999 1050 ntTSL 520.8■□□□□ 0.921e-5■□□□□ 10.6
LSM11P83369 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.761e-5■□□□□ 10.6
LSM11P83369 GAK-203ENST00000502799 2281 ntTSL 219.1■□□□□ 0.651e-5■□□□□ 10.6
LSM11P83369 SSUH2-205ENST00000420394 1634 ntTSL 1 (best)18.84■□□□□ 0.611e-5■□□□□ 10.6
LSM11P83369 KLHL17-203ENST00000466300 913 ntTSL 318.72■□□□□ 0.591e-5■□□□□ 10.6
LSM11P83369 CDC37-207ENST00000589755 793 ntTSL 218.21■□□□□ 0.511e-10■□□□□ 10.6
LSM11P83369 SSUH2-204ENST00000415132 1645 ntTSL 517.45■□□□□ 0.381e-5■□□□□ 10.6
Retrieved 100 of 11,495 protein–RNA pairs in 52.8 ms