Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 AL139246.5-201ENST00000606645 996 ntBASIC13.55□□□□□ -0.24
RPL39P62891 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 AC100791.3-201ENST00000617619 330 ntBASIC13.55□□□□□ -0.24
RPL39P62891 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 PKD1P1-201ENST00000458669 6805 ntBASIC13.55□□□□□ -0.24
RPL39P62891 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RPL39P62891 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
RPL39P62891 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RPL39P62891 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P62891 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P62891 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P62891 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P62891 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 RARRES2P4-201ENST00000514074 484 ntBASIC13.54□□□□□ -0.24
RPL39P62891 AC023632.3-201ENST00000521633 145 ntBASIC13.54□□□□□ -0.24
RPL39P62891 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P62891 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL39P62891 PLLP-204ENST00000569059 665 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL39P62891 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13.54□□□□□ -0.24
RPL39P62891 AC013268.1-206ENST00000638368 961 ntBASIC13.54□□□□□ -0.24
RPL39P62891 AC112229.1-201ENST00000639295 961 ntBASIC13.54□□□□□ -0.24
RPL39P62891 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P62891 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P62891 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC13.54□□□□□ -0.24
RPL39P62891 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
RPL39P62891 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P62891 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.54□□□□□ -0.24
RPL39P62891 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
RPL39P62891 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.54□□□□□ -0.24
RPL39P62891 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RPL39P62891 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC13.53□□□□□ -0.24
RPL39P62891 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P62891 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RPL39P62891 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
RPL39P62891 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P62891 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 AC007322.4-201ENST00000509611 723 ntBASIC13.53□□□□□ -0.24
RPL39P62891 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 BRWD1-AS2-201ENST00000603064 1028 ntBASIC13.53□□□□□ -0.24
RPL39P62891 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.53□□□□□ -0.24
RPL39P62891 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
RPL39P62891 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms