Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
NR1H2P55055 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NR1H2P55055 AC245052.3-201ENST00000450182 901 ntBASIC18.11■□□□□ 0.49
NR1H2P55055 AC093787.1-201ENST00000450396 207 ntBASIC18.11■□□□□ 0.49
NR1H2P55055 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.11■□□□□ 0.49
NR1H2P55055 RARRES2P4-201ENST00000514074 484 ntBASIC18.11■□□□□ 0.49
NR1H2P55055 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.11■□□□□ 0.49
NR1H2P55055 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.11■□□□□ 0.49
NR1H2P55055 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NR1H2P55055 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.11■□□□□ 0.49
NR1H2P55055 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.11■□□□□ 0.49
NR1H2P55055 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.11■□□□□ 0.49
NR1H2P55055 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NR1H2P55055 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NR1H2P55055 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.1■□□□□ 0.49
NR1H2P55055 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.1■□□□□ 0.49
NR1H2P55055 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.1■□□□□ 0.49
NR1H2P55055 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.1■□□□□ 0.49
NR1H2P55055 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.1■□□□□ 0.49
NR1H2P55055 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NR1H2P55055 BX276092.2-201ENST00000417668 665 ntBASIC18.1■□□□□ 0.49
NR1H2P55055 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.1■□□□□ 0.49
NR1H2P55055 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.1■□□□□ 0.49
NR1H2P55055 AC098934.4-201ENST00000564127 592 ntBASIC18.1■□□□□ 0.49
NR1H2P55055 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NR1H2P55055 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.1■□□□□ 0.49
NR1H2P55055 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
NR1H2P55055 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.1■□□□□ 0.49
NR1H2P55055 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NR1H2P55055 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NR1H2P55055 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.09■□□□□ 0.49
NR1H2P55055 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 AC067852.2-201ENST00000590513 2313 ntBASIC18.09■□□□□ 0.49
NR1H2P55055 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
NR1H2P55055 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.09■□□□□ 0.49
NR1H2P55055 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.09■□□□□ 0.49
NR1H2P55055 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NR1H2P55055 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NR1H2P55055 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NR1H2P55055 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
NR1H2P55055 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NR1H2P55055 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 AL161938.1-201ENST00000569833 2180 ntBASIC18.08■□□□□ 0.49
NR1H2P55055 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NR1H2P55055 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NR1H2P55055 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.08■□□□□ 0.49
NR1H2P55055 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.08■□□□□ 0.49
NR1H2P55055 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NR1H2P55055 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.08■□□□□ 0.48
NR1H2P55055 AC097658.1-201ENST00000475555 843 ntBASIC18.08■□□□□ 0.48
NR1H2P55055 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.08■□□□□ 0.48
NR1H2P55055 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NR1H2P55055 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NR1H2P55055 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms