Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CENPAP49450 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.35■□□□□ 0.37
CENPAP49450 TNXA-203ENST00000507684 2038 ntBASIC17.35■□□□□ 0.37
CENPAP49450 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 LETM1P2-201ENST00000597330 2178 ntBASIC17.35■□□□□ 0.37
CENPAP49450 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.35■□□□□ 0.37
CENPAP49450 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.34■□□□□ 0.37
CENPAP49450 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CENPAP49450 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.34■□□□□ 0.37
CENPAP49450 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.34■□□□□ 0.37
CENPAP49450 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPAP49450 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.34■□□□□ 0.37
CENPAP49450 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.34■□□□□ 0.37
CENPAP49450 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPAP49450 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.34■□□□□ 0.37
CENPAP49450 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.34■□□□□ 0.37
CENPAP49450 AL109923.1-201ENST00000618799 583 ntBASIC17.34■□□□□ 0.37
CENPAP49450 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CENPAP49450 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CENPAP49450 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CENPAP49450 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CENPAP49450 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPAP49450 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPAP49450 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CENPAP49450 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CENPAP49450 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPAP49450 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.33■□□□□ 0.36
CENPAP49450 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CENPAP49450 GUSBP6-202ENST00000438529 1198 ntBASIC17.33■□□□□ 0.36
CENPAP49450 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.33■□□□□ 0.36
CENPAP49450 AL138781.1-201ENST00000566567 1274 ntBASIC17.33■□□□□ 0.36
CENPAP49450 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.33■□□□□ 0.36
CENPAP49450 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPAP49450 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.33■□□□□ 0.36
CENPAP49450 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CENPAP49450 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CENPAP49450 AC004408.2-201ENST00000623613 2777 ntBASIC17.32■□□□□ 0.36
CENPAP49450 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CENPAP49450 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CENPAP49450 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CENPAP49450 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.32■□□□□ 0.36
CENPAP49450 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CENPAP49450 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CENPAP49450 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.32■□□□□ 0.36
CENPAP49450 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CENPAP49450 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CENPAP49450 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CENPAP49450 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms