Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.22□□□□□ -0.29
RPL13AP40429 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RPL13AP40429 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RPL13AP40429 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
RPL13AP40429 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 AC135050.7-201ENST00000624508 2218 ntBASIC13.21□□□□□ -0.29
RPL13AP40429 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 NOC2LP2-201ENST00000407594 1944 ntBASIC13.21□□□□□ -0.29
RPL13AP40429 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC13.21□□□□□ -0.29
RPL13AP40429 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RPL13AP40429 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.21□□□□□ -0.29
RPL13AP40429 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
RPL13AP40429 AC104581.1-202ENST00000635932 2618 ntBASIC13.21□□□□□ -0.29
RPL13AP40429 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 SBF1P1-201ENST00000444527 5631 ntBASIC13.21□□□□□ -0.29
RPL13AP40429 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
RPL13AP40429 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC13.21□□□□□ -0.29
RPL13AP40429 AC233992.3-201ENST00000607491 485 ntBASIC13.21□□□□□ -0.29
RPL13AP40429 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC13.21□□□□□ -0.29
RPL13AP40429 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.21□□□□□ -0.29
RPL13AP40429 AL691432.2-201ENST00000607222 2038 ntBASIC13.21□□□□□ -0.29
RPL13AP40429 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.21□□□□□ -0.29
RPL13AP40429 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RPL13AP40429 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.21□□□□□ -0.3
RPL13AP40429 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL13AP40429 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RPL13AP40429 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RPL13AP40429 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
RPL13AP40429 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 AC006455.2-201ENST00000429931 906 ntBASIC13.2□□□□□ -0.3
RPL13AP40429 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC13.2□□□□□ -0.3
RPL13AP40429 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.2□□□□□ -0.3
RPL13AP40429 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC13.2□□□□□ -0.3
RPL13AP40429 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RPL13AP40429 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
RPL13AP40429 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RPL13AP40429 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RPL13AP40429 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms