Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN7P35236 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PTPN7P35236 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN7P35236 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PTPN7P35236 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PTPN7P35236 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PTPN7P35236 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN7P35236 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN7P35236 AC026366.1-201ENST00000488803 879 ntBASIC19.81■□□□□ 0.76
PTPN7P35236 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN7P35236 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN7P35236 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN7P35236 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN7P35236 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN7P35236 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN7P35236 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN7P35236 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.8■□□□□ 0.76
PTPN7P35236 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PTPN7P35236 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPN7P35236 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN7P35236 TSPY23P-201ENST00000440136 739 ntBASIC19.8■□□□□ 0.76
PTPN7P35236 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
PTPN7P35236 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.8■□□□□ 0.76
PTPN7P35236 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.8■□□□□ 0.76
PTPN7P35236 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PTPN7P35236 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPN7P35236 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN7P35236 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PTPN7P35236 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PTPN7P35236 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PTPN7P35236 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPN7P35236 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.79■□□□□ 0.76
PTPN7P35236 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.79■□□□□ 0.76
PTPN7P35236 KRT17P3-201ENST00000420566 1262 ntBASIC19.79■□□□□ 0.76
PTPN7P35236 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN7P35236 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
PTPN7P35236 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN7P35236 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN7P35236 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.79■□□□□ 0.76
PTPN7P35236 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PTPN7P35236 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PTPN7P35236 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN7P35236 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN7P35236 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PTPN7P35236 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN7P35236 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.78■□□□□ 0.76
PTPN7P35236 KRT8P41-201ENST00000533985 1514 ntBASIC19.78■□□□□ 0.76
PTPN7P35236 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTPN7P35236 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
PTPN7P35236 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms