Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CCND1P24385 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.24■□□□□ 0.67
CCND1P24385 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.24■□□□□ 0.67
CCND1P24385 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 AP001271.2-201ENST00000624018 1556 ntBASIC19.24■□□□□ 0.67
CCND1P24385 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CCND1P24385 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.24■□□□□ 0.67
CCND1P24385 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.24■□□□□ 0.67
CCND1P24385 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.24■□□□□ 0.67
CCND1P24385 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.24■□□□□ 0.67
CCND1P24385 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 AC068880.1-201ENST00000507289 2297 ntBASIC19.24■□□□□ 0.67
CCND1P24385 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
CCND1P24385 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CCND1P24385 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.24■□□□□ 0.67
CCND1P24385 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CCND1P24385 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.23■□□□□ 0.67
CCND1P24385 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCND1P24385 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CCND1P24385 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CCND1P24385 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 PHGDH-210ENST00000641115 1638 ntBASIC19.23■□□□□ 0.67
CCND1P24385 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
CCND1P24385 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.23■□□□□ 0.67
CCND1P24385 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.23■□□□□ 0.67
CCND1P24385 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.23■□□□□ 0.67
CCND1P24385 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.23■□□□□ 0.67
CCND1P24385 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 AC090340.1-201ENST00000620778 4980 ntBASIC19.23■□□□□ 0.67
CCND1P24385 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CCND1P24385 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCND1P24385 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCND1P24385 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CCND1P24385 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.22■□□□□ 0.67
CCND1P24385 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.22■□□□□ 0.67
CCND1P24385 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCND1P24385 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
CCND1P24385 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.22■□□□□ 0.67
CCND1P24385 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCND1P24385 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.22■□□□□ 0.67
CCND1P24385 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCND1P24385 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCND1P24385 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
CCND1P24385 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCND1P24385 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCND1P24385 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.21■□□□□ 0.67
CCND1P24385 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.21■□□□□ 0.67
CCND1P24385 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms