Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.38
FREM3P0C091 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FREM3P0C091 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.39■□□□□ 0.38
FREM3P0C091 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FREM3P0C091 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
FREM3P0C091 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
FREM3P0C091 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.39■□□□□ 0.38
FREM3P0C091 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.39■□□□□ 0.37
FREM3P0C091 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM3P0C091 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM3P0C091 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.39■□□□□ 0.37
FREM3P0C091 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
FREM3P0C091 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM3P0C091 AP000692.2-201ENST00000608391 879 ntBASIC17.39■□□□□ 0.37
FREM3P0C091 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FREM3P0C091 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM3P0C091 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.39■□□□□ 0.37
FREM3P0C091 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
FREM3P0C091 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.38■□□□□ 0.37
FREM3P0C091 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.38■□□□□ 0.37
FREM3P0C091 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.38■□□□□ 0.37
FREM3P0C091 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
FREM3P0C091 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
FREM3P0C091 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.38■□□□□ 0.37
FREM3P0C091 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.38■□□□□ 0.37
FREM3P0C091 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FREM3P0C091 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
FREM3P0C091 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.38■□□□□ 0.37
FREM3P0C091 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.38■□□□□ 0.37
FREM3P0C091 KRT18P21-201ENST00000515767 1272 ntBASIC17.38■□□□□ 0.37
FREM3P0C091 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.38■□□□□ 0.37
FREM3P0C091 AC092865.7-201ENST00000641832 219 ntBASIC17.38■□□□□ 0.37
FREM3P0C091 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.38■□□□□ 0.37
FREM3P0C091 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.38■□□□□ 0.37
FREM3P0C091 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FREM3P0C091 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.37■□□□□ 0.37
FREM3P0C091 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.37■□□□□ 0.37
FREM3P0C091 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
FREM3P0C091 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
FREM3P0C091 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.37■□□□□ 0.37
FREM3P0C091 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.37■□□□□ 0.37
FREM3P0C091 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.37■□□□□ 0.37
FREM3P0C091 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FREM3P0C091 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.37■□□□□ 0.37
FREM3P0C091 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM3P0C091 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.36■□□□□ 0.37
FREM3P0C091 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.36■□□□□ 0.37
FREM3P0C091 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.36■□□□□ 0.37
FREM3P0C091 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
FREM3P0C091 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms