Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.07■□□□□ 0.96
CCP110O43303 HLA-G-202ENST00000376815 851 ntBASIC21.07■□□□□ 0.96
CCP110O43303 HLA-G-203ENST00000376818 1127 ntBASIC21.07■□□□□ 0.96
CCP110O43303 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCP110O43303 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.07■□□□□ 0.96
CCP110O43303 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.07■□□□□ 0.96
CCP110O43303 AC083906.2-201ENST00000511578 360 ntBASIC21.07■□□□□ 0.96
CCP110O43303 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.07■□□□□ 0.96
CCP110O43303 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.07■□□□□ 0.96
CCP110O43303 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.07■□□□□ 0.96
CCP110O43303 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.07■□□□□ 0.96
CCP110O43303 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.07■□□□□ 0.96
CCP110O43303 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCP110O43303 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.06■□□□□ 0.96
CCP110O43303 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.06■□□□□ 0.96
CCP110O43303 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCP110O43303 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.06■□□□□ 0.96
CCP110O43303 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.06■□□□□ 0.96
CCP110O43303 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
CCP110O43303 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCP110O43303 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.05■□□□□ 0.96
CCP110O43303 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC21.05■□□□□ 0.96
CCP110O43303 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.05■□□□□ 0.96
CCP110O43303 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.05■□□□□ 0.96
CCP110O43303 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 BX276092.2-201ENST00000417668 665 ntBASIC21.05■□□□□ 0.96
CCP110O43303 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.05■□□□□ 0.96
CCP110O43303 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.05■□□□□ 0.96
CCP110O43303 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.05■□□□□ 0.96
CCP110O43303 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.05■□□□□ 0.96
CCP110O43303 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.05■□□□□ 0.96
CCP110O43303 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCP110O43303 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.04■□□□□ 0.96
CCP110O43303 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.04■□□□□ 0.96
CCP110O43303 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 LSM12P1-201ENST00000411836 588 ntBASIC21.04■□□□□ 0.96
CCP110O43303 NCF1B-203ENST00000435988 1254 ntBASIC21.04■□□□□ 0.96
CCP110O43303 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.04■□□□□ 0.96
CCP110O43303 GUSBP6-202ENST00000438529 1198 ntBASIC21.04■□□□□ 0.96
CCP110O43303 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.04■□□□□ 0.96
CCP110O43303 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.04■□□□□ 0.96
CCP110O43303 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.04■□□□□ 0.96
CCP110O43303 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCP110O43303 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.03■□□□□ 0.96
CCP110O43303 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.03■□□□□ 0.96
CCP110O43303 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCP110O43303 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCP110O43303 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.03■□□□□ 0.96
CCP110O43303 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCP110O43303 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.03■□□□□ 0.96
CCP110O43303 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms