Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC162PA2VCL2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 RPS2P4-201ENST00000476944 856 ntBASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 AP002982.1-201ENST00000492365 877 ntBASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 AL445675.2-201ENST00000620291 557 ntBASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC162PA2VCL2 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 AC142381.4-202ENST00000563973 229 ntBASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 IRX1P1-201ENST00000438849 1838 ntBASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 KRT8P41-201ENST00000533985 1514 ntBASIC19.15■□□□□ 0.66
CCDC162PA2VCL2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.14■□□□□ 0.66
CCDC162PA2VCL2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCDC162PA2VCL2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 Z85996.1-201ENST00000494644 937 ntBASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 AL353708.3-201ENST00000610272 989 ntBASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC162PA2VCL2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AC120498.9-201ENST00000339021 3867 ntBASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 GCSHP5-201ENST00000443090 522 ntBASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 AL158047.1-201ENST00000445918 881 ntBASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC162PA2VCL2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms