Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 GPX1P1-201ENST00000388829 606 ntBASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 AL512625.2-201ENST00000417533 625 ntBASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 AC007322.1-201ENST00000426983 750 ntBASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.26□□□□□ -0.13
IGKV3D-20A0A0C4DH25 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 WIZP1-201ENST00000531444 2299 ntBASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 FP475955.4-201ENST00000623131 1990 ntBASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 LSM12P1-201ENST00000411836 588 ntBASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 AC093525.10-201ENST00000625130 1569 ntBASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 LETM1P2-201ENST00000597330 2178 ntBASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
IGKV3D-20A0A0C4DH25 Z98044.1-201ENST00000632503 1764 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms