Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TRBV6-7A0A0A0MS04 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC104417.2-201ENST00000562989 1793 ntBASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 RPS2P52-201ENST00000469610 820 ntBASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC092118.2-201ENST00000613495 667 ntBASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC124283.5-201ENST00000624661 1809 ntBASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 CROCCP5-201ENST00000436658 830 ntBASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 IKBKGP1-201ENST00000612193 1073 ntBASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 AC006557.6-201ENST00000623071 864 ntBASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRBV6-7A0A0A0MS04 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 KRT8P8-201ENST00000434750 1448 ntBASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRBV6-7A0A0A0MS04 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 AP006587.1-201ENST00000534129 1502 ntBASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.01■□□□□ 0.15
TRBV6-7A0A0A0MS04 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms