Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC23■■□□□ 1.27
DDX49Q9Y6V7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 MIR718-201ENST00000390190 70 ntBASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 AC239809.2-201ENST00000415381 517 ntBASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
DDX49Q9Y6V7 AL138781.2-201ENST00000617896 1843 ntBASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 AC138932.1-201ENST00000534164 6830 ntBASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
DDX49Q9Y6V7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.97■■□□□ 1.27
DDX49Q9Y6V7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 RPS2P55-201ENST00000397318 883 ntBASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ECEL1P3-201ENST00000427961 737 ntBASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 AC107956.1-201ENST00000494359 873 ntBASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
DDX49Q9Y6V7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
DDX49Q9Y6V7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
DDX49Q9Y6V7 GXYLT1P3-201ENST00000453058 1193 ntBASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms