Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGB1Q9Y5G3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 AC010536.3-201ENST00000620306 533 ntBASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGB1Q9Y5G3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 AC007322.4-201ENST00000509611 723 ntBASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 MFSD11-216ENST00000590393 1141 ntBASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGB1Q9Y5G3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ABHD17AP1-201ENST00000358206 933 ntBASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 AC137761.2-201ENST00000561729 223 ntBASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 AC145350.3-201ENST00000569033 163 ntBASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 AC013268.1-206ENST00000638368 961 ntBASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 AC112229.1-201ENST00000639295 961 ntBASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.53■□□□□ 0.4
PCDHGB1Q9Y5G3 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms