Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 HLA-G-202ENST00000376815 851 ntBASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 HLA-G-203ENST00000376818 1127 ntBASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
ERGIC3Q9Y282 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 AL136967.2-201ENST00000623968 743 ntBASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERGIC3Q9Y282 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERGIC3Q9Y282 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ERGIC3Q9Y282 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ERGIC3Q9Y282 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms