Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 AC104417.2-201ENST00000562989 1793 ntBASIC17.51■□□□□ 0.39
CHRNA9Q9UGM1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 GCSHP5-201ENST00000443090 522 ntBASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CHRNA9Q9UGM1 HTR7P1-201ENST00000538670 1336 ntBASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AL353807.1-201ENST00000427475 662 ntBASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AL158047.1-201ENST00000445918 881 ntBASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 HLA-A-209ENST00000638375 975 ntBASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHRNA9Q9UGM1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 RARRES2P10-201ENST00000564312 460 ntBASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHRNA9Q9UGM1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHRNA9Q9UGM1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms