Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC00554-201ENST00000564841 3011 ntBASIC22.55■■□□□ 1.2
RTN4Q9NQC3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 AC008406.3-201ENST00000620001 1374 ntBASIC22.55■■□□□ 1.2
RTN4Q9NQC3 HYMAI-201ENST00000635591 3347 ntBASIC22.55■■□□□ 1.2
RTN4Q9NQC3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 AC091305.1-201ENST00000479476 895 ntBASIC22.55■■□□□ 1.2
RTN4Q9NQC3 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RTN4Q9NQC3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 AC110285.6-201ENST00000617652 491 ntBASIC22.54■■□□□ 1.2
RTN4Q9NQC3 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RTN4Q9NQC3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RTN4Q9NQC3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 RARRES2P11-201ENST00000635158 484 ntBASIC22.52■■□□□ 1.2
RTN4Q9NQC3 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
RTN4Q9NQC3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RTN4Q9NQC3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RTN4Q9NQC3 PCDH8P1-201ENST00000428983 2773 ntBASIC22.51■■□□□ 1.19
RTN4Q9NQC3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.51■■□□□ 1.19
RTN4Q9NQC3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms