Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.75■□□□□ 0.91
NXF3Q9H4D5 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 AC117947.1-201ENST00000427448 529 ntBASIC20.74■□□□□ 0.91
NXF3Q9H4D5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 BX664615.1-201ENST00000443558 458 ntBASIC20.74■□□□□ 0.91
NXF3Q9H4D5 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 WWOX-216ENST00000569818 525 ntBASIC20.74■□□□□ 0.91
NXF3Q9H4D5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.74■□□□□ 0.91
NXF3Q9H4D5 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 ARMC10P1-201ENST00000313754 855 ntBASIC20.73■□□□□ 0.91
NXF3Q9H4D5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NXF3Q9H4D5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.72■□□□□ 0.91
NXF3Q9H4D5 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 TSPY21P-201ENST00000433481 731 ntBASIC20.72■□□□□ 0.91
NXF3Q9H4D5 AC139887.4-201ENST00000607877 719 ntBASIC20.72■□□□□ 0.91
NXF3Q9H4D5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.72■□□□□ 0.91
NXF3Q9H4D5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 AK4P3-201ENST00000418260 669 ntBASIC20.71■□□□□ 0.91
NXF3Q9H4D5 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 NTF6B-201ENST00000591913 560 ntBASIC20.71■□□□□ 0.91
NXF3Q9H4D5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 AC141257.4-201ENST00000634557 245 ntBASIC20.71■□□□□ 0.91
NXF3Q9H4D5 AC136944.6-201ENST00000634818 245 ntBASIC20.71■□□□□ 0.91
NXF3Q9H4D5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NXF3Q9H4D5 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms