Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.063e-6■■■■□ 19.8
XRN2Q9H0D6 BDH1-204ENST00000431056 453 ntTSL 515.27■□□□□ 0.045e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-213ENST00000601267 782 ntTSL 215.18■□□□□ 0.022e-8■■■■□ 19.8
XRN2Q9H0D6 C19orf48-211ENST00000599004 866 ntTSL 514.96□□□□□ -0.012e-8■■■■□ 19.8
XRN2Q9H0D6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.91□□□□□ -0.026e-34■■■■□ 19.8
XRN2Q9H0D6 C19orf48-209ENST00000597705 892 ntTSL 314.89□□□□□ -0.032e-8■■■■□ 19.8
XRN2Q9H0D6 TAF4-202ENST00000436129 2440 ntTSL 214.87□□□□□ -0.033e-6■■■■□ 19.8
XRN2Q9H0D6 ECHDC2-213ENST00000487040 557 ntTSL 314.76□□□□□ -0.053e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-208ENST00000597493 971 ntTSL 214.59□□□□□ -0.072e-8■■■■□ 19.8
XRN2Q9H0D6 C19orf48-210ENST00000598463 1844 ntTSL 1 (best)14.58□□□□□ -0.082e-8■■■■□ 19.8
XRN2Q9H0D6 EZR-204ENST00000476189 956 ntTSL 314.57□□□□□ -0.083e-10■■■■□ 19.8
XRN2Q9H0D6 AC111170.3-201ENST00000624282 2464 ntBASIC14.53□□□□□ -0.083e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL22-206ENST00000451553 724 ntTSL 314.51□□□□□ -0.096e-8■■■■□ 19.8
XRN2Q9H0D6 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.093e-6■■■■□ 19.8
XRN2Q9H0D6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.13e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.123e-6■■■■□ 19.8
XRN2Q9H0D6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.123e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-209ENST00000587969 484 ntTSL 214.28□□□□□ -0.123e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.143e-6■■■■□ 19.8
XRN2Q9H0D6 TSEN54-210ENST00000583634 282 ntTSL 214.18□□□□□ -0.143e-6■■■■□ 19.8
XRN2Q9H0D6 DUS3L-207ENST00000590087 379 ntTSL 214.1□□□□□ -0.153e-6■■■■□ 19.8
XRN2Q9H0D6 C1orf35-204ENST00000472617 3554 ntTSL 214.04□□□□□ -0.163e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-205ENST00000596287 827 ntTSL 213.95□□□□□ -0.182e-8■■■■□ 19.8
XRN2Q9H0D6 ZBTB16-208ENST00000544220 773 ntTSL 313.94□□□□□ -0.183e-6■■■■□ 19.8
XRN2Q9H0D6 RBM10-206ENST00000628161 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.23e-6■■■■□ 19.8
XRN2Q9H0D6 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.215e-6■■■■□ 19.8
XRN2Q9H0D6 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.228e-7■■■■□ 19.8
XRN2Q9H0D6 MCF2L-218ENST00000442625 2710 ntTSL 1 (best)13.63□□□□□ -0.233e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-204ENST00000595794 941 ntTSL 1 (best)13.55□□□□□ -0.242e-8■■■■□ 19.8
XRN2Q9H0D6 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.243e-6■■■■□ 19.8
XRN2Q9H0D6 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.251e-6■■■■□ 19.8
XRN2Q9H0D6 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.273e-6■■■■□ 19.8
XRN2Q9H0D6 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.275e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.273e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-206ENST00000587210 576 ntTSL 513.28□□□□□ -0.283e-6■■■■□ 19.8
XRN2Q9H0D6 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.33e-6■■■■□ 19.8
XRN2Q9H0D6 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC13.15□□□□□ -0.33e-6■■■■□ 19.8
XRN2Q9H0D6 ECHDC2-217ENST00000492992 370 ntTSL 312.89□□□□□ -0.353e-6■■■■□ 19.8
XRN2Q9H0D6 ZBTB16-205ENST00000535700 572 ntTSL 312.88□□□□□ -0.353e-6■■■■□ 19.8
XRN2Q9H0D6 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.353e-6■■■■□ 19.8
XRN2Q9H0D6 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.353e-6■■■■□ 19.8
XRN2Q9H0D6 CDIP1-210ENST00000586728 756 ntTSL 512.72□□□□□ -0.373e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.393e-6■■■■□ 19.8
XRN2Q9H0D6 SHC2-204ENST00000590113 632 ntTSL 512.33□□□□□ -0.443e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.443e-6■■■■□ 19.8
XRN2Q9H0D6 RREB1-208ENST00000483150 2833 ntTSL 1 (best)12.28□□□□□ -0.443e-6■■■■□ 19.8
XRN2Q9H0D6 CHID1-205ENST00000454838 3255 ntTSL 5 BASIC12.27□□□□□ -0.453e-7■■■■□ 19.8
XRN2Q9H0D6 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.453e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-205ENST00000535176 421 ntTSL 312.13□□□□□ -0.473e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-206ENST00000537116 2496 ntTSL 212.1□□□□□ -0.473e-6■■■■□ 19.8
XRN2Q9H0D6 SGSM3-213ENST00000485962 2973 ntTSL 512.09□□□□□ -0.473e-6■■■■□ 19.8
XRN2Q9H0D6 SLC12A4-203ENST00000537830 3525 ntTSL 2 BASIC12.04□□□□□ -0.483e-6■■■■□ 19.8
XRN2Q9H0D6 MAP4-206ENST00000423088 899 ntTSL 311.81□□□□□ -0.528e-7■■■■□ 19.8
XRN2Q9H0D6 SP3-202ENST00000416195 3627 ntAPPRIS ALT2 TSL 1 (best)11.61□□□□□ -0.556e-7■■■■□ 19.8
XRN2Q9H0D6 SFXN5-208ENST00000463277 575 ntTSL 411.61□□□□□ -0.553e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.573e-6■■■■□ 19.8
XRN2Q9H0D6 RBM10-203ENST00000377604 3747 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.583e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-212ENST00000571759 3609 nt11.45□□□□□ -0.583e-6■■■■□ 19.8
XRN2Q9H0D6 SLC2A9-213ENST00000513129 738 ntTSL 311.43□□□□□ -0.581e-6■■■■□ 19.8
XRN2Q9H0D6 SLC12A4-204ENST00000541864 3627 ntTSL 2 BASIC11.42□□□□□ -0.583e-6■■■■□ 19.8
XRN2Q9H0D6 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.63e-7■■■■□ 19.8
XRN2Q9H0D6 ZBTB16-207ENST00000541602 4427 ntTSL 1 (best)10.79□□□□□ -0.683e-6■■■■□ 19.8
XRN2Q9H0D6 AC010618.3-203ENST00000595116 313 ntTSL 3 BASIC10.79□□□□□ -0.683e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-207ENST00000566416 780 ntTSL 310.54□□□□□ -0.723e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-206ENST00000471559 812 ntTSL 410□□□□□ -0.813e-6■■■■□ 19.8
XRN2Q9H0D6 SFXN5-209ENST00000464825 532 ntTSL 49.54□□□□□ -0.883e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC9.5□□□□□ -0.893e-6■■■■□ 19.8
XRN2Q9H0D6 MAP4-207ENST00000426837 8920 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.98e-7■■■■□ 19.8
XRN2Q9H0D6 POLRMT-204ENST00000590336 380 ntTSL 39.31□□□□□ -0.925e-7■■■■□ 19.8
XRN2Q9H0D6 POLR3E-213ENST00000565117 1549 ntTSL 29.2□□□□□ -0.943e-6■■■■□ 19.8
XRN2Q9H0D6 TBPL1-201ENST00000237264 4228 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.943e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC8.98□□□□□ -0.975e-6■■■■□ 19.8
XRN2Q9H0D6 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.993e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.85□□□□□ -0.993e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.063e-6■■■■□ 19.8
XRN2Q9H0D6 MAP4-210ENST00000439356 2743 ntTSL 1 (best) BASIC8.41□□□□□ -1.068e-7■■■■□ 19.8
XRN2Q9H0D6 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC8.37□□□□□ -1.075e-6■■■■□ 19.8
XRN2Q9H0D6 ENAH-201ENST00000284563 665 ntTSL 58.25□□□□□ -1.093e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-206ENST00000467183 3566 ntTSL 1 (best)8.22□□□□□ -1.093e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.08□□□□□ -1.125e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-204ENST00000415428 3457 ntTSL 1 (best)8.01□□□□□ -1.133e-6■■■■□ 19.8
XRN2Q9H0D6 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.153e-6■■■■□ 19.8
XRN2Q9H0D6 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.35□□□□□ -1.233e-6■■■■□ 19.8
XRN2Q9H0D6 RGS12-219ENST00000511805 552 ntTSL 1 (best)6.82□□□□□ -1.325e-6■■■■□ 19.8
XRN2Q9H0D6 QRICH1-203ENST00000411682 359 ntTSL 56.53□□□□□ -1.363e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.373e-6■■■■□ 19.8
XRN2Q9H0D6 POLR3E-206ENST00000563282 448 ntTSL 26.12□□□□□ -1.433e-6■■■■□ 19.8
XRN2Q9H0D6 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.433e-6■■■■□ 19.8
XRN2Q9H0D6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.63□□□□□ -1.513e-6■■■■□ 19.8
XRN2Q9H0D6 ADSL-207ENST00000498234 323 ntTSL 25.38□□□□□ -1.553e-6■■■■□ 19.8
XRN2Q9H0D6 ZFYVE9-203ENST00000361625 2625 ntTSL 1 (best)5.35□□□□□ -1.553e-6■■■■□ 19.8
XRN2Q9H0D6 TBCK-217ENST00000510927 2826 ntTSL 25.07□□□□□ -1.63e-6■■■■□ 19.8
XRN2Q9H0D6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.73e-6■■■■□ 19.8
XRN2Q9H0D6 QRICH1-207ENST00000450685 426 ntTSL 23.97□□□□□ -1.773e-6■■■■□ 19.8
XRN2Q9H0D6 UBQLN1-205ENST00000529923 471 ntTSL 23.22□□□□□ -1.893e-6■■■■□ 19.8
XRN2Q9H0D6 ERF-206ENST00000596818 566 ntTSL 320.17■□□□□ 0.824e-8■■■■□ 19.8
XRN2Q9H0D6 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.983e-6■■■■□ 19.8
XRN2Q9H0D6 PPP1R12C-209ENST00000592993 2269 ntTSL 1 (best)21.17■□□□□ 0.983e-6■■■■□ 19.8
XRN2Q9H0D6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.95■□□□□ 0.783e-6■■■■□ 19.8
XRN2Q9H0D6 GOLGA2-206ENST00000468488 531 ntTSL 314.72□□□□□ -0.051e-6■■■■□ 19.8
Retrieved 100 of 21,068 protein–RNA pairs in 113.7 ms